Gene : Thhalv10029374m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31707:SF25 - PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED Genomic Order:  223
Name:  ? Thhalv10029374m.g Secondary Identifier:  ? PAC:20197385
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10029374m.g 0.5kb upstream 0.5kb upstream 2847 true scaffold_3: 1089630-1092476 Eutrema salsugineum
Thhalv10029374m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1091977-1092476 Eutrema salsugineum
Thhalv10029374m.g 0.5kb downstream 0.5kb downstream 2847 true scaffold_3: 1089130-1091976 Eutrema salsugineum
Thhalv10029374m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1089130-1089629 Eutrema salsugineum
Thhalv10029374m.g 1.0kb upstream 1.0kb upstream 3347 true scaffold_3: 1089630-1092976 Eutrema salsugineum
Thhalv10029374m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1091977-1092976 Eutrema salsugineum
Thhalv10029374m.g 1.0kb downstream 1.0kb downstream 3347 true scaffold_3: 1088630-1091976 Eutrema salsugineum
Thhalv10029374m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1088630-1089629 Eutrema salsugineum
Thhalv10029374m.g 2.0kb upstream 2.0kb upstream 4347 true scaffold_3: 1089630-1093976 Eutrema salsugineum
Thhalv10029374m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1091977-1093976 Eutrema salsugineum
Thhalv10029374m.g 2.0kb downstream 2.0kb downstream 4347 true scaffold_3: 1087630-1091976 Eutrema salsugineum
Thhalv10029374m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1087630-1089629 Eutrema salsugineum
Thhalv10029374m.g 5.0kb upstream 5.0kb upstream 7347 true scaffold_3: 1089630-1096976 Eutrema salsugineum
Thhalv10029374m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1091977-1096976 Eutrema salsugineum
Thhalv10029374m.g 5.0kb downstream 5.0kb downstream 7347 true scaffold_3: 1084630-1091976 Eutrema salsugineum
Thhalv10029374m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1084630-1089629 Eutrema salsugineum
Thhalv10029374m.g 10.0kb upstream 10.0kb upstream 12347 true scaffold_3: 1089630-1101976 Eutrema salsugineum
Thhalv10029374m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1091977-1101976 Eutrema salsugineum
Thhalv10029374m.g 10.0kb downstream 10.0kb downstream 12347 true scaffold_3: 1079630-1091976 Eutrema salsugineum
Thhalv10029374m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1079630-1089629 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378121 5261 Brassicaceae View MSA
123838203 5264 Brassicales-Malvales View MSA
124343008 5266 SBM View MSA
124253387 5268 Malvidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain