Gene : Thhalv10029500m.g E. salsugineum v1.0
Defline:  (1 of 93) KOG0417 - Ubiquitin-protein ligase Genomic Order:  712
Name:  ? Thhalv10029500m.g Secondary Identifier:  ? PAC:20197727
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10029500m.g 0.5kb upstream 0.5kb upstream 1097 true scaffold_3: 5299265-5300361 Eutrema salsugineum
Thhalv10029500m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5299862-5300361 Eutrema salsugineum
Thhalv10029500m.g 0.5kb downstream 0.5kb downstream 1097 true scaffold_3: 5298765-5299861 Eutrema salsugineum
Thhalv10029500m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5298765-5299264 Eutrema salsugineum
Thhalv10029500m.g 1.0kb upstream 1.0kb upstream 1597 true scaffold_3: 5299265-5300861 Eutrema salsugineum
Thhalv10029500m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5299862-5300861 Eutrema salsugineum
Thhalv10029500m.g 1.0kb downstream 1.0kb downstream 1597 true scaffold_3: 5298265-5299861 Eutrema salsugineum
Thhalv10029500m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5298265-5299264 Eutrema salsugineum
Thhalv10029500m.g 2.0kb upstream 2.0kb upstream 2597 true scaffold_3: 5299265-5301861 Eutrema salsugineum
Thhalv10029500m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5299862-5301861 Eutrema salsugineum
Thhalv10029500m.g 2.0kb downstream 2.0kb downstream 2597 true scaffold_3: 5297265-5299861 Eutrema salsugineum
Thhalv10029500m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5297265-5299264 Eutrema salsugineum
Thhalv10029500m.g 5.0kb upstream 5.0kb upstream 5597 true scaffold_3: 5299265-5304861 Eutrema salsugineum
Thhalv10029500m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5299862-5304861 Eutrema salsugineum
Thhalv10029500m.g 5.0kb downstream 5.0kb downstream 5597 true scaffold_3: 5294265-5299861 Eutrema salsugineum
Thhalv10029500m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5294265-5299264 Eutrema salsugineum
Thhalv10029500m.g 10.0kb upstream 10.0kb upstream 10597 true scaffold_3: 5299265-5309861 Eutrema salsugineum
Thhalv10029500m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5299862-5309861 Eutrema salsugineum
Thhalv10029500m.g 10.0kb downstream 10.0kb downstream 10597 true scaffold_3: 5289265-5299861 Eutrema salsugineum
Thhalv10029500m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5289265-5299264 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030981 5273 Angiosperm View MSA
122382259 5261 Brassicaceae View MSA
123842039 5264 Brassicales-Malvales View MSA
124323203 5266 SBM View MSA
124255587 5268 Malvidae View MSA
124041272 5270 Rosid View MSA
123647489 5271 Pentapetalae View MSA
122798530 5272 Eudicot View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain