Gene : Thhalv10003003m.g E. salsugineum v1.0
Defline:  (1 of 10) PF05553 - Cotton fibre expressed protein Genomic Order:  126
Name:  ? Thhalv10003003m.g Secondary Identifier:  ? PAC:20196383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003003m.g 0.5kb upstream 0.5kb upstream 1199 true scaffold_4: 4197600-4198798 Eutrema salsugineum
Thhalv10003003m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4198299-4198798 Eutrema salsugineum
Thhalv10003003m.g 0.5kb downstream 0.5kb downstream 1199 true scaffold_4: 4197100-4198298 Eutrema salsugineum
Thhalv10003003m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4197100-4197599 Eutrema salsugineum
Thhalv10003003m.g 1.0kb upstream 1.0kb upstream 1699 true scaffold_4: 4197600-4199298 Eutrema salsugineum
Thhalv10003003m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4198299-4199298 Eutrema salsugineum
Thhalv10003003m.g 1.0kb downstream 1.0kb downstream 1699 true scaffold_4: 4196600-4198298 Eutrema salsugineum
Thhalv10003003m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4196600-4197599 Eutrema salsugineum
Thhalv10003003m.g 2.0kb upstream 2.0kb upstream 2699 true scaffold_4: 4197600-4200298 Eutrema salsugineum
Thhalv10003003m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4198299-4200298 Eutrema salsugineum
Thhalv10003003m.g 2.0kb downstream 2.0kb downstream 2699 true scaffold_4: 4195600-4198298 Eutrema salsugineum
Thhalv10003003m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4195600-4197599 Eutrema salsugineum
Thhalv10003003m.g 5.0kb upstream 5.0kb upstream 5699 true scaffold_4: 4197600-4203298 Eutrema salsugineum
Thhalv10003003m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4198299-4203298 Eutrema salsugineum
Thhalv10003003m.g 5.0kb downstream 5.0kb downstream 5699 true scaffold_4: 4192600-4198298 Eutrema salsugineum
Thhalv10003003m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4192600-4197599 Eutrema salsugineum
Thhalv10003003m.g 10.0kb upstream 10.0kb upstream 10699 true scaffold_4: 4197600-4208298 Eutrema salsugineum
Thhalv10003003m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4198299-4208298 Eutrema salsugineum
Thhalv10003003m.g 10.0kb downstream 10.0kb downstream 10699 true scaffold_4: 4187600-4198298 Eutrema salsugineum
Thhalv10003003m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4187600-4197599 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371781 5261 Brassicaceae View MSA
123834051 5264 Brassicales-Malvales View MSA
124349840 5266 SBM View MSA
124250915 5268 Malvidae View MSA
124070345 5270 Rosid View MSA
123746595 5271 Pentapetalae View MSA
122789663 5272 Eudicot View MSA
122050891 5273 Angiosperm View MSA
121312190 5274 Embryophyte View MSA
123349389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain