Gene : Thhalv10003028m.g E. salsugineum v1.0
Defline:  (1 of 5) 4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Genomic Order:  625
Name:  ? Thhalv10003028m.g Secondary Identifier:  ? PAC:20196884
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3462 Eutrema salsugineum pathologic  
Esalsugineum PWY-3481 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003028m.g 0.5kb upstream 0.5kb upstream 1775 true scaffold_4: 11401610-11403384 Eutrema salsugineum
Thhalv10003028m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11402885-11403384 Eutrema salsugineum
Thhalv10003028m.g 0.5kb downstream 0.5kb downstream 1775 true scaffold_4: 11401110-11402884 Eutrema salsugineum
Thhalv10003028m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11401110-11401609 Eutrema salsugineum
Thhalv10003028m.g 1.0kb upstream 1.0kb upstream 2275 true scaffold_4: 11401610-11403884 Eutrema salsugineum
Thhalv10003028m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11402885-11403884 Eutrema salsugineum
Thhalv10003028m.g 1.0kb downstream 1.0kb downstream 2275 true scaffold_4: 11400610-11402884 Eutrema salsugineum
Thhalv10003028m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11400610-11401609 Eutrema salsugineum
Thhalv10003028m.g 2.0kb upstream 2.0kb upstream 3275 true scaffold_4: 11401610-11404884 Eutrema salsugineum
Thhalv10003028m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11402885-11404884 Eutrema salsugineum
Thhalv10003028m.g 2.0kb downstream 2.0kb downstream 3275 true scaffold_4: 11399610-11402884 Eutrema salsugineum
Thhalv10003028m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11399610-11401609 Eutrema salsugineum
Thhalv10003028m.g 5.0kb upstream 5.0kb upstream 6275 true scaffold_4: 11401610-11407884 Eutrema salsugineum
Thhalv10003028m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11402885-11407884 Eutrema salsugineum
Thhalv10003028m.g 5.0kb downstream 5.0kb downstream 6275 true scaffold_4: 11396610-11402884 Eutrema salsugineum
Thhalv10003028m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11396610-11401609 Eutrema salsugineum
Thhalv10003028m.g 10.0kb upstream 10.0kb upstream 11275 true scaffold_4: 11401610-11412884 Eutrema salsugineum
Thhalv10003028m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11402885-11412884 Eutrema salsugineum
Thhalv10003028m.g 10.0kb downstream 10.0kb downstream 11275 true scaffold_4: 11391610-11402884 Eutrema salsugineum
Thhalv10003028m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11391610-11401609 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374466 5261 Brassicaceae View MSA
123800763 5264 Brassicales-Malvales View MSA
124298135 5266 SBM View MSA
124250436 5268 Malvidae View MSA
124066223 5270 Rosid View MSA
123745222 5271 Pentapetalae View MSA
122787752 5272 Eudicot View MSA
122046279 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain