Gene : Thhalv10002968m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11709:SF88 - LACCASE-14 Genomic Order:  145
Name:  ? Thhalv10002968m.g Secondary Identifier:  ? PAC:20196248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5466 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002968m.g 0.5kb upstream 0.5kb upstream 2857 true scaffold_4: 4416486-4419342 Eutrema salsugineum
Thhalv10002968m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4418843-4419342 Eutrema salsugineum
Thhalv10002968m.g 0.5kb downstream 0.5kb downstream 2857 true scaffold_4: 4415986-4418842 Eutrema salsugineum
Thhalv10002968m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4415986-4416485 Eutrema salsugineum
Thhalv10002968m.g 1.0kb upstream 1.0kb upstream 3357 true scaffold_4: 4416486-4419842 Eutrema salsugineum
Thhalv10002968m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4418843-4419842 Eutrema salsugineum
Thhalv10002968m.g 1.0kb downstream 1.0kb downstream 3357 true scaffold_4: 4415486-4418842 Eutrema salsugineum
Thhalv10002968m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4415486-4416485 Eutrema salsugineum
Thhalv10002968m.g 2.0kb upstream 2.0kb upstream 4357 true scaffold_4: 4416486-4420842 Eutrema salsugineum
Thhalv10002968m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4418843-4420842 Eutrema salsugineum
Thhalv10002968m.g 2.0kb downstream 2.0kb downstream 4357 true scaffold_4: 4414486-4418842 Eutrema salsugineum
Thhalv10002968m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4414486-4416485 Eutrema salsugineum
Thhalv10002968m.g 5.0kb upstream 5.0kb upstream 7357 true scaffold_4: 4416486-4423842 Eutrema salsugineum
Thhalv10002968m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4418843-4423842 Eutrema salsugineum
Thhalv10002968m.g 5.0kb downstream 5.0kb downstream 7357 true scaffold_4: 4411486-4418842 Eutrema salsugineum
Thhalv10002968m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4411486-4416485 Eutrema salsugineum
Thhalv10002968m.g 10.0kb upstream 10.0kb upstream 12357 true scaffold_4: 4416486-4428842 Eutrema salsugineum
Thhalv10002968m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4418843-4428842 Eutrema salsugineum
Thhalv10002968m.g 10.0kb downstream 10.0kb downstream 12357 true scaffold_4: 4406486-4418842 Eutrema salsugineum
Thhalv10002968m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4406486-4416485 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358441 5261 Brassicaceae Singleton cluster - no MSA
123796406 5264 Brassicales-Malvales Singleton cluster - no MSA
124294162 5266 SBM Singleton cluster - no MSA
124146735 5268 Malvidae Singleton cluster - no MSA
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain