Gene : Thhalv10003118m.g E. salsugineum v1.0
Defline:  (1 of 6) PF03004 - Plant transposase (Ptta/En/Spm family) (Transposase_24) Genomic Order:  109
Name:  ? Thhalv10003118m.g Secondary Identifier:  ? PAC:20196720
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003118m.g 0.5kb upstream 0.5kb upstream 3265 true scaffold_4: 3912483-3915747 Eutrema salsugineum
Thhalv10003118m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3915248-3915747 Eutrema salsugineum
Thhalv10003118m.g 0.5kb downstream 0.5kb downstream 3265 true scaffold_4: 3911983-3915247 Eutrema salsugineum
Thhalv10003118m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3911983-3912482 Eutrema salsugineum
Thhalv10003118m.g 1.0kb upstream 1.0kb upstream 3765 true scaffold_4: 3912483-3916247 Eutrema salsugineum
Thhalv10003118m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3915248-3916247 Eutrema salsugineum
Thhalv10003118m.g 1.0kb downstream 1.0kb downstream 3765 true scaffold_4: 3911483-3915247 Eutrema salsugineum
Thhalv10003118m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3911483-3912482 Eutrema salsugineum
Thhalv10003118m.g 2.0kb upstream 2.0kb upstream 4765 true scaffold_4: 3912483-3917247 Eutrema salsugineum
Thhalv10003118m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3915248-3917247 Eutrema salsugineum
Thhalv10003118m.g 2.0kb downstream 2.0kb downstream 4765 true scaffold_4: 3910483-3915247 Eutrema salsugineum
Thhalv10003118m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3910483-3912482 Eutrema salsugineum
Thhalv10003118m.g 5.0kb upstream 5.0kb upstream 7765 true scaffold_4: 3912483-3920247 Eutrema salsugineum
Thhalv10003118m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3915248-3920247 Eutrema salsugineum
Thhalv10003118m.g 5.0kb downstream 5.0kb downstream 7765 true scaffold_4: 3907483-3915247 Eutrema salsugineum
Thhalv10003118m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3907483-3912482 Eutrema salsugineum
Thhalv10003118m.g 10.0kb upstream 10.0kb upstream 12765 true scaffold_4: 3912483-3925247 Eutrema salsugineum
Thhalv10003118m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3915248-3925247 Eutrema salsugineum
Thhalv10003118m.g 10.0kb downstream 10.0kb downstream 12765 true scaffold_4: 3902483-3915247 Eutrema salsugineum
Thhalv10003118m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3902483-3912482 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121509298 5273 Angiosperm Singleton cluster - no MSA
122358529 5261 Brassicaceae Singleton cluster - no MSA
123796488 5264 Brassicales-Malvales Singleton cluster - no MSA
124294242 5266 SBM Singleton cluster - no MSA
124146809 5268 Malvidae Singleton cluster - no MSA
123873051 5270 Rosid Singleton cluster - no MSA
123457165 5271 Pentapetalae Singleton cluster - no MSA
122492584 5272 Eudicot Singleton cluster - no MSA
120782425 5274 Embryophyte Singleton cluster - no MSA
122824472 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain