Gene : Thhalv10002523m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11712:SF275 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL Genomic Order:  123
Name:  ? Thhalv10002523m.g Secondary Identifier:  ? PAC:20196733
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum FASYN-ELONG-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5156 Eutrema salsugineum pathologic  
Esalsugineum PWY-5971 Eutrema salsugineum pathologic  
Esalsugineum PWY-5989 Eutrema salsugineum pathologic  
Esalsugineum PWY-6282 Eutrema salsugineum pathologic  
Esalsugineum PWY-7388 Eutrema salsugineum pathologic  
Esalsugineum PWY-7663 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002523m.g 0.5kb upstream 0.5kb upstream 3705 true scaffold_4: 4169836-4173540 Eutrema salsugineum
Thhalv10002523m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4169836-4170335 Eutrema salsugineum
Thhalv10002523m.g 0.5kb downstream 0.5kb downstream 3705 true scaffold_4: 4170336-4174040 Eutrema salsugineum
Thhalv10002523m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4173541-4174040 Eutrema salsugineum
Thhalv10002523m.g 1.0kb upstream 1.0kb upstream 4205 true scaffold_4: 4169336-4173540 Eutrema salsugineum
Thhalv10002523m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4169336-4170335 Eutrema salsugineum
Thhalv10002523m.g 1.0kb downstream 1.0kb downstream 4205 true scaffold_4: 4170336-4174540 Eutrema salsugineum
Thhalv10002523m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4173541-4174540 Eutrema salsugineum
Thhalv10002523m.g 2.0kb upstream 2.0kb upstream 5205 true scaffold_4: 4168336-4173540 Eutrema salsugineum
Thhalv10002523m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4168336-4170335 Eutrema salsugineum
Thhalv10002523m.g 2.0kb downstream 2.0kb downstream 5205 true scaffold_4: 4170336-4175540 Eutrema salsugineum
Thhalv10002523m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4173541-4175540 Eutrema salsugineum
Thhalv10002523m.g 5.0kb upstream 5.0kb upstream 8205 true scaffold_4: 4165336-4173540 Eutrema salsugineum
Thhalv10002523m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4165336-4170335 Eutrema salsugineum
Thhalv10002523m.g 5.0kb downstream 5.0kb downstream 8205 true scaffold_4: 4170336-4178540 Eutrema salsugineum
Thhalv10002523m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4173541-4178540 Eutrema salsugineum
Thhalv10002523m.g 10.0kb upstream 10.0kb upstream 13205 true scaffold_4: 4160336-4173540 Eutrema salsugineum
Thhalv10002523m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4160336-4170335 Eutrema salsugineum
Thhalv10002523m.g 10.0kb downstream 10.0kb downstream 13205 true scaffold_4: 4170336-4183540 Eutrema salsugineum
Thhalv10002523m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4173541-4183540 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371309 5261 Brassicaceae View MSA
123829991 5264 Brassicales-Malvales View MSA
124344955 5266 SBM View MSA
124240268 5268 Malvidae View MSA
124060523 5270 Rosid View MSA
123738041 5271 Pentapetalae View MSA
122786623 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain