Gene : Thhalv10006561m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Genomic Order:  29
Name:  ? Thhalv10006561m.g Secondary Identifier:  ? PAC:20185440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6352 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006561m.g 0.5kb upstream 0.5kb upstream 6745 true scaffold_5: 395495-402239 Eutrema salsugineum
Thhalv10006561m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 401740-402239 Eutrema salsugineum
Thhalv10006561m.g 0.5kb downstream 0.5kb downstream 6745 true scaffold_5: 394995-401739 Eutrema salsugineum
Thhalv10006561m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 394995-395494 Eutrema salsugineum
Thhalv10006561m.g 1.0kb upstream 1.0kb upstream 7245 true scaffold_5: 395495-402739 Eutrema salsugineum
Thhalv10006561m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 401740-402739 Eutrema salsugineum
Thhalv10006561m.g 1.0kb downstream 1.0kb downstream 7245 true scaffold_5: 394495-401739 Eutrema salsugineum
Thhalv10006561m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 394495-395494 Eutrema salsugineum
Thhalv10006561m.g 2.0kb upstream 2.0kb upstream 8245 true scaffold_5: 395495-403739 Eutrema salsugineum
Thhalv10006561m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 401740-403739 Eutrema salsugineum
Thhalv10006561m.g 2.0kb downstream 2.0kb downstream 8245 true scaffold_5: 393495-401739 Eutrema salsugineum
Thhalv10006561m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 393495-395494 Eutrema salsugineum
Thhalv10006561m.g 5.0kb upstream 5.0kb upstream 11245 true scaffold_5: 395495-406739 Eutrema salsugineum
Thhalv10006561m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 401740-406739 Eutrema salsugineum
Thhalv10006561m.g 5.0kb downstream 5.0kb downstream 11245 true scaffold_5: 390495-401739 Eutrema salsugineum
Thhalv10006561m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 390495-395494 Eutrema salsugineum
Thhalv10006561m.g 10.0kb upstream 10.0kb upstream 16245 true scaffold_5: 395495-411739 Eutrema salsugineum
Thhalv10006561m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 401740-411739 Eutrema salsugineum
Thhalv10006561m.g 10.0kb downstream 10.0kb downstream 16245 true scaffold_5: 385495-401739 Eutrema salsugineum
Thhalv10006561m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 385495-395494 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364432 5261 Brassicaceae View MSA
123830954 5264 Brassicales-Malvales View MSA
124339290 5266 SBM View MSA
124242021 5268 Malvidae View MSA
124065286 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain