Gene : Thhalv10006912m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR13763 - BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 Genomic Order:  2850
Name:  ? Thhalv10006912m.g Secondary Identifier:  ? PAC:20188113
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006912m.g 0.5kb upstream 0.5kb upstream 4114 true scaffold_5: 14587817-14591930 Eutrema salsugineum
Thhalv10006912m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 14591431-14591930 Eutrema salsugineum
Thhalv10006912m.g 0.5kb downstream 0.5kb downstream 4114 true scaffold_5: 14587317-14591430 Eutrema salsugineum
Thhalv10006912m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 14587317-14587816 Eutrema salsugineum
Thhalv10006912m.g 1.0kb upstream 1.0kb upstream 4614 true scaffold_5: 14587817-14592430 Eutrema salsugineum
Thhalv10006912m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 14591431-14592430 Eutrema salsugineum
Thhalv10006912m.g 1.0kb downstream 1.0kb downstream 4614 true scaffold_5: 14586817-14591430 Eutrema salsugineum
Thhalv10006912m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 14586817-14587816 Eutrema salsugineum
Thhalv10006912m.g 2.0kb upstream 2.0kb upstream 5614 true scaffold_5: 14587817-14593430 Eutrema salsugineum
Thhalv10006912m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 14591431-14593430 Eutrema salsugineum
Thhalv10006912m.g 2.0kb downstream 2.0kb downstream 5614 true scaffold_5: 14585817-14591430 Eutrema salsugineum
Thhalv10006912m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 14585817-14587816 Eutrema salsugineum
Thhalv10006912m.g 5.0kb upstream 5.0kb upstream 8614 true scaffold_5: 14587817-14596430 Eutrema salsugineum
Thhalv10006912m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 14591431-14596430 Eutrema salsugineum
Thhalv10006912m.g 5.0kb downstream 5.0kb downstream 8614 true scaffold_5: 14582817-14591430 Eutrema salsugineum
Thhalv10006912m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 14582817-14587816 Eutrema salsugineum
Thhalv10006912m.g 10.0kb upstream 10.0kb upstream 13614 true scaffold_5: 14587817-14601430 Eutrema salsugineum
Thhalv10006912m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 14591431-14601430 Eutrema salsugineum
Thhalv10006912m.g 10.0kb downstream 10.0kb downstream 13614 true scaffold_5: 14577817-14591430 Eutrema salsugineum
Thhalv10006912m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 14577817-14587816 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368475 5261 Brassicaceae View MSA
123832266 5264 Brassicales-Malvales View MSA
124344562 5266 SBM View MSA
124249547 5268 Malvidae View MSA
124074324 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain