Gene : Thhalv10007072m.g E. salsugineum v1.0
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  1519
Name:  ? Thhalv10007072m.g Secondary Identifier:  ? PAC:20185356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum SER-GLYSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum SERSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007072m.g 0.5kb upstream 0.5kb upstream 4350 true scaffold_5: 9394472-9398821 Eutrema salsugineum
Thhalv10007072m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9398322-9398821 Eutrema salsugineum
Thhalv10007072m.g 0.5kb downstream 0.5kb downstream 4350 true scaffold_5: 9393972-9398321 Eutrema salsugineum
Thhalv10007072m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9393972-9394471 Eutrema salsugineum
Thhalv10007072m.g 1.0kb upstream 1.0kb upstream 4850 true scaffold_5: 9394472-9399321 Eutrema salsugineum
Thhalv10007072m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9398322-9399321 Eutrema salsugineum
Thhalv10007072m.g 1.0kb downstream 1.0kb downstream 4850 true scaffold_5: 9393472-9398321 Eutrema salsugineum
Thhalv10007072m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9393472-9394471 Eutrema salsugineum
Thhalv10007072m.g 2.0kb upstream 2.0kb upstream 5850 true scaffold_5: 9394472-9400321 Eutrema salsugineum
Thhalv10007072m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9398322-9400321 Eutrema salsugineum
Thhalv10007072m.g 2.0kb downstream 2.0kb downstream 5850 true scaffold_5: 9392472-9398321 Eutrema salsugineum
Thhalv10007072m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9392472-9394471 Eutrema salsugineum
Thhalv10007072m.g 5.0kb upstream 5.0kb upstream 8850 true scaffold_5: 9394472-9403321 Eutrema salsugineum
Thhalv10007072m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9398322-9403321 Eutrema salsugineum
Thhalv10007072m.g 5.0kb downstream 5.0kb downstream 8850 true scaffold_5: 9389472-9398321 Eutrema salsugineum
Thhalv10007072m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9389472-9394471 Eutrema salsugineum
Thhalv10007072m.g 10.0kb upstream 10.0kb upstream 13850 true scaffold_5: 9394472-9408321 Eutrema salsugineum
Thhalv10007072m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9398322-9408321 Eutrema salsugineum
Thhalv10007072m.g 10.0kb downstream 10.0kb downstream 13850 true scaffold_5: 9384472-9398321 Eutrema salsugineum
Thhalv10007072m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9384472-9394471 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363628 5261 Brassicaceae View MSA
123837054 5264 Brassicales-Malvales View MSA
124346998 5266 SBM View MSA
124246038 5268 Malvidae View MSA
124069252 5270 Rosid View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain