Gene : Thhalv10007298m.g E. salsugineum v1.0
Defline:  (1 of 4) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1781
Name:  ? Thhalv10007298m.g Secondary Identifier:  ? PAC:20186424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007298m.g 0.5kb upstream 0.5kb upstream 3757 true scaffold_5: 10363285-10367041 Eutrema salsugineum
Thhalv10007298m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10366542-10367041 Eutrema salsugineum
Thhalv10007298m.g 0.5kb downstream 0.5kb downstream 3757 true scaffold_5: 10362785-10366541 Eutrema salsugineum
Thhalv10007298m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10362785-10363284 Eutrema salsugineum
Thhalv10007298m.g 1.0kb upstream 1.0kb upstream 4257 true scaffold_5: 10363285-10367541 Eutrema salsugineum
Thhalv10007298m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10366542-10367541 Eutrema salsugineum
Thhalv10007298m.g 1.0kb downstream 1.0kb downstream 4257 true scaffold_5: 10362285-10366541 Eutrema salsugineum
Thhalv10007298m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10362285-10363284 Eutrema salsugineum
Thhalv10007298m.g 2.0kb upstream 2.0kb upstream 5257 true scaffold_5: 10363285-10368541 Eutrema salsugineum
Thhalv10007298m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10366542-10368541 Eutrema salsugineum
Thhalv10007298m.g 2.0kb downstream 2.0kb downstream 5257 true scaffold_5: 10361285-10366541 Eutrema salsugineum
Thhalv10007298m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10361285-10363284 Eutrema salsugineum
Thhalv10007298m.g 5.0kb upstream 5.0kb upstream 8257 true scaffold_5: 10363285-10371541 Eutrema salsugineum
Thhalv10007298m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10366542-10371541 Eutrema salsugineum
Thhalv10007298m.g 5.0kb downstream 5.0kb downstream 8257 true scaffold_5: 10358285-10366541 Eutrema salsugineum
Thhalv10007298m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10358285-10363284 Eutrema salsugineum
Thhalv10007298m.g 10.0kb upstream 10.0kb upstream 13257 true scaffold_5: 10363285-10376541 Eutrema salsugineum
Thhalv10007298m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10366542-10376541 Eutrema salsugineum
Thhalv10007298m.g 10.0kb downstream 10.0kb downstream 13257 true scaffold_5: 10353285-10366541 Eutrema salsugineum
Thhalv10007298m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10353285-10363284 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375928 5261 Brassicaceae View MSA
123837330 5264 Brassicales-Malvales View MSA
124337991 5266 SBM View MSA
124245504 5268 Malvidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain