Gene : Thhalv10007359m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  2270
Name:  ? Thhalv10007359m.g Secondary Identifier:  ? PAC:20185509
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5188 Eutrema salsugineum pathologic  
Esalsugineum PWY-5918 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007359m.g 0.5kb upstream 0.5kb upstream 2890 true scaffold_5: 12347710-12350599 Eutrema salsugineum
Thhalv10007359m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12347710-12348209 Eutrema salsugineum
Thhalv10007359m.g 0.5kb downstream 0.5kb downstream 2890 true scaffold_5: 12348210-12351099 Eutrema salsugineum
Thhalv10007359m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12350600-12351099 Eutrema salsugineum
Thhalv10007359m.g 1.0kb upstream 1.0kb upstream 3390 true scaffold_5: 12347210-12350599 Eutrema salsugineum
Thhalv10007359m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12347210-12348209 Eutrema salsugineum
Thhalv10007359m.g 1.0kb downstream 1.0kb downstream 3390 true scaffold_5: 12348210-12351599 Eutrema salsugineum
Thhalv10007359m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12350600-12351599 Eutrema salsugineum
Thhalv10007359m.g 2.0kb upstream 2.0kb upstream 4390 true scaffold_5: 12346210-12350599 Eutrema salsugineum
Thhalv10007359m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12346210-12348209 Eutrema salsugineum
Thhalv10007359m.g 2.0kb downstream 2.0kb downstream 4390 true scaffold_5: 12348210-12352599 Eutrema salsugineum
Thhalv10007359m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12350600-12352599 Eutrema salsugineum
Thhalv10007359m.g 5.0kb upstream 5.0kb upstream 7390 true scaffold_5: 12343210-12350599 Eutrema salsugineum
Thhalv10007359m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12343210-12348209 Eutrema salsugineum
Thhalv10007359m.g 5.0kb downstream 5.0kb downstream 7390 true scaffold_5: 12348210-12355599 Eutrema salsugineum
Thhalv10007359m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12350600-12355599 Eutrema salsugineum
Thhalv10007359m.g 10.0kb upstream 10.0kb upstream 12390 true scaffold_5: 12338210-12350599 Eutrema salsugineum
Thhalv10007359m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12338210-12348209 Eutrema salsugineum
Thhalv10007359m.g 10.0kb downstream 10.0kb downstream 12390 true scaffold_5: 12348210-12360599 Eutrema salsugineum
Thhalv10007359m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12350600-12360599 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511214 5273 Angiosperm View MSA
122373797 5261 Brassicaceae View MSA
123800622 5264 Brassicales-Malvales View MSA
124298016 5266 SBM View MSA
124149764 5268 Malvidae View MSA
123875505 5270 Rosid View MSA
123459315 5271 Pentapetalae View MSA
122494708 5272 Eudicot View MSA
120784272 5274 Embryophyte View MSA
122826200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain