Gene : Thhalv10007134m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  31
Name:  ? Thhalv10007134m.g Secondary Identifier:  ? PAC:20188194
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007134m.g 0.5kb upstream 0.5kb upstream 3475 true scaffold_5: 455297-458771 Eutrema salsugineum
Thhalv10007134m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 455297-455796 Eutrema salsugineum
Thhalv10007134m.g 0.5kb downstream 0.5kb downstream 3475 true scaffold_5: 455797-459271 Eutrema salsugineum
Thhalv10007134m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 458772-459271 Eutrema salsugineum
Thhalv10007134m.g 1.0kb upstream 1.0kb upstream 3975 true scaffold_5: 454797-458771 Eutrema salsugineum
Thhalv10007134m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 454797-455796 Eutrema salsugineum
Thhalv10007134m.g 1.0kb downstream 1.0kb downstream 3975 true scaffold_5: 455797-459771 Eutrema salsugineum
Thhalv10007134m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 458772-459771 Eutrema salsugineum
Thhalv10007134m.g 2.0kb upstream 2.0kb upstream 4975 true scaffold_5: 453797-458771 Eutrema salsugineum
Thhalv10007134m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 453797-455796 Eutrema salsugineum
Thhalv10007134m.g 2.0kb downstream 2.0kb downstream 4975 true scaffold_5: 455797-460771 Eutrema salsugineum
Thhalv10007134m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 458772-460771 Eutrema salsugineum
Thhalv10007134m.g 5.0kb upstream 5.0kb upstream 7975 true scaffold_5: 450797-458771 Eutrema salsugineum
Thhalv10007134m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 450797-455796 Eutrema salsugineum
Thhalv10007134m.g 5.0kb downstream 5.0kb downstream 7975 true scaffold_5: 455797-463771 Eutrema salsugineum
Thhalv10007134m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 458772-463771 Eutrema salsugineum
Thhalv10007134m.g 10.0kb upstream 10.0kb upstream 12975 true scaffold_5: 445797-458771 Eutrema salsugineum
Thhalv10007134m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 445797-455796 Eutrema salsugineum
Thhalv10007134m.g 10.0kb downstream 10.0kb downstream 12975 true scaffold_5: 455797-468771 Eutrema salsugineum
Thhalv10007134m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 458772-468771 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366056 5261 Brassicaceae View MSA
123840797 5264 Brassicales-Malvales View MSA
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain