Gene : Thhalv10007716m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10836:SF41 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC-RELATED Genomic Order:  1656
Name:  ? Thhalv10007716m.g Secondary Identifier:  ? PAC:20186511
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ANAEROFRUCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum ANAGLYCOLYSIS-PWY Eutrema salsugineum pathologic  
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-1042 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY66-399 Eutrema salsugineum pathologic  
Esalsugineum SUCSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007716m.g 0.5kb upstream 0.5kb upstream 3647 true scaffold_5: 9901051-9904697 Eutrema salsugineum
Thhalv10007716m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9904198-9904697 Eutrema salsugineum
Thhalv10007716m.g 0.5kb downstream 0.5kb downstream 3647 true scaffold_5: 9900551-9904197 Eutrema salsugineum
Thhalv10007716m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9900551-9901050 Eutrema salsugineum
Thhalv10007716m.g 1.0kb upstream 1.0kb upstream 4147 true scaffold_5: 9901051-9905197 Eutrema salsugineum
Thhalv10007716m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9904198-9905197 Eutrema salsugineum
Thhalv10007716m.g 1.0kb downstream 1.0kb downstream 4147 true scaffold_5: 9900051-9904197 Eutrema salsugineum
Thhalv10007716m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9900051-9901050 Eutrema salsugineum
Thhalv10007716m.g 2.0kb upstream 2.0kb upstream 5147 true scaffold_5: 9901051-9906197 Eutrema salsugineum
Thhalv10007716m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9904198-9906197 Eutrema salsugineum
Thhalv10007716m.g 2.0kb downstream 2.0kb downstream 5147 true scaffold_5: 9899051-9904197 Eutrema salsugineum
Thhalv10007716m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9899051-9901050 Eutrema salsugineum
Thhalv10007716m.g 5.0kb upstream 5.0kb upstream 8147 true scaffold_5: 9901051-9909197 Eutrema salsugineum
Thhalv10007716m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9904198-9909197 Eutrema salsugineum
Thhalv10007716m.g 5.0kb downstream 5.0kb downstream 8147 true scaffold_5: 9896051-9904197 Eutrema salsugineum
Thhalv10007716m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9896051-9901050 Eutrema salsugineum
Thhalv10007716m.g 10.0kb upstream 10.0kb upstream 13147 true scaffold_5: 9901051-9914197 Eutrema salsugineum
Thhalv10007716m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9904198-9914197 Eutrema salsugineum
Thhalv10007716m.g 10.0kb downstream 10.0kb downstream 13147 true scaffold_5: 9891051-9904197 Eutrema salsugineum
Thhalv10007716m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9891051-9901050 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374998 5261 Brassicaceae View MSA
123836882 5264 Brassicales-Malvales View MSA
124346127 5266 SBM View MSA
124243370 5268 Malvidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain