Gene : Thhalv10007695m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  3029
Name:  ? Thhalv10007695m.g Secondary Identifier:  ? PAC:20187891
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5173 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PYRUVDEHYD-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007695m.g 0.5kb upstream 0.5kb upstream 2469 true scaffold_5: 15225900-15228368 Eutrema salsugineum
Thhalv10007695m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 15227869-15228368 Eutrema salsugineum
Thhalv10007695m.g 0.5kb downstream 0.5kb downstream 2469 true scaffold_5: 15225400-15227868 Eutrema salsugineum
Thhalv10007695m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 15225400-15225899 Eutrema salsugineum
Thhalv10007695m.g 1.0kb upstream 1.0kb upstream 2969 true scaffold_5: 15225900-15228868 Eutrema salsugineum
Thhalv10007695m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 15227869-15228868 Eutrema salsugineum
Thhalv10007695m.g 1.0kb downstream 1.0kb downstream 2969 true scaffold_5: 15224900-15227868 Eutrema salsugineum
Thhalv10007695m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 15224900-15225899 Eutrema salsugineum
Thhalv10007695m.g 2.0kb upstream 2.0kb upstream 3969 true scaffold_5: 15225900-15229868 Eutrema salsugineum
Thhalv10007695m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 15227869-15229868 Eutrema salsugineum
Thhalv10007695m.g 2.0kb downstream 2.0kb downstream 3969 true scaffold_5: 15223900-15227868 Eutrema salsugineum
Thhalv10007695m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 15223900-15225899 Eutrema salsugineum
Thhalv10007695m.g 5.0kb upstream 5.0kb upstream 6969 true scaffold_5: 15225900-15232868 Eutrema salsugineum
Thhalv10007695m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 15227869-15232868 Eutrema salsugineum
Thhalv10007695m.g 5.0kb downstream 5.0kb downstream 6969 true scaffold_5: 15220900-15227868 Eutrema salsugineum
Thhalv10007695m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 15220900-15225899 Eutrema salsugineum
Thhalv10007695m.g 10.0kb upstream 10.0kb upstream 11969 true scaffold_5: 15225900-15237868 Eutrema salsugineum
Thhalv10007695m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 15227869-15237868 Eutrema salsugineum
Thhalv10007695m.g 10.0kb downstream 10.0kb downstream 11969 true scaffold_5: 15215900-15227868 Eutrema salsugineum
Thhalv10007695m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 15215900-15225899 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375294 5261 Brassicaceae View MSA
123835447 5264 Brassicales-Malvales View MSA
124343284 5266 SBM View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain