Gene : Thhalv10007796m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  490
Name:  ? Thhalv10007796m.g Secondary Identifier:  ? PAC:20187706
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5173 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PYRUVDEHYD-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007796m.g 0.5kb upstream 0.5kb upstream 3060 true scaffold_5: 4650663-4653722 Eutrema salsugineum
Thhalv10007796m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4650663-4651162 Eutrema salsugineum
Thhalv10007796m.g 0.5kb downstream 0.5kb downstream 3060 true scaffold_5: 4651163-4654222 Eutrema salsugineum
Thhalv10007796m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4653723-4654222 Eutrema salsugineum
Thhalv10007796m.g 1.0kb upstream 1.0kb upstream 3560 true scaffold_5: 4650163-4653722 Eutrema salsugineum
Thhalv10007796m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4650163-4651162 Eutrema salsugineum
Thhalv10007796m.g 1.0kb downstream 1.0kb downstream 3560 true scaffold_5: 4651163-4654722 Eutrema salsugineum
Thhalv10007796m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4653723-4654722 Eutrema salsugineum
Thhalv10007796m.g 2.0kb upstream 2.0kb upstream 4560 true scaffold_5: 4649163-4653722 Eutrema salsugineum
Thhalv10007796m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4649163-4651162 Eutrema salsugineum
Thhalv10007796m.g 2.0kb downstream 2.0kb downstream 4560 true scaffold_5: 4651163-4655722 Eutrema salsugineum
Thhalv10007796m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4653723-4655722 Eutrema salsugineum
Thhalv10007796m.g 5.0kb upstream 5.0kb upstream 7560 true scaffold_5: 4646163-4653722 Eutrema salsugineum
Thhalv10007796m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4646163-4651162 Eutrema salsugineum
Thhalv10007796m.g 5.0kb downstream 5.0kb downstream 7560 true scaffold_5: 4651163-4658722 Eutrema salsugineum
Thhalv10007796m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4653723-4658722 Eutrema salsugineum
Thhalv10007796m.g 10.0kb upstream 10.0kb upstream 12560 true scaffold_5: 4641163-4653722 Eutrema salsugineum
Thhalv10007796m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4641163-4651162 Eutrema salsugineum
Thhalv10007796m.g 10.0kb downstream 10.0kb downstream 12560 true scaffold_5: 4651163-4663722 Eutrema salsugineum
Thhalv10007796m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4653723-4663722 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365093 5261 Brassicaceae View MSA
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain