Gene : Thhalv10007886m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21022:SF4 - AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 1, CHLOROPLASTIC Genomic Order:  2086
Name:  ? Thhalv10007886m.g Secondary Identifier:  ? PAC:20187563
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3462 Eutrema salsugineum pathologic  
Esalsugineum PWY-3481 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007886m.g 0.5kb upstream 0.5kb upstream 4115 true scaffold_5: 11589775-11593889 Eutrema salsugineum
Thhalv10007886m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11593390-11593889 Eutrema salsugineum
Thhalv10007886m.g 0.5kb downstream 0.5kb downstream 4115 true scaffold_5: 11589275-11593389 Eutrema salsugineum
Thhalv10007886m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11589275-11589774 Eutrema salsugineum
Thhalv10007886m.g 1.0kb upstream 1.0kb upstream 4615 true scaffold_5: 11589775-11594389 Eutrema salsugineum
Thhalv10007886m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11593390-11594389 Eutrema salsugineum
Thhalv10007886m.g 1.0kb downstream 1.0kb downstream 4615 true scaffold_5: 11588775-11593389 Eutrema salsugineum
Thhalv10007886m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11588775-11589774 Eutrema salsugineum
Thhalv10007886m.g 2.0kb upstream 2.0kb upstream 5615 true scaffold_5: 11589775-11595389 Eutrema salsugineum
Thhalv10007886m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11593390-11595389 Eutrema salsugineum
Thhalv10007886m.g 2.0kb downstream 2.0kb downstream 5615 true scaffold_5: 11587775-11593389 Eutrema salsugineum
Thhalv10007886m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11587775-11589774 Eutrema salsugineum
Thhalv10007886m.g 5.0kb upstream 5.0kb upstream 8615 true scaffold_5: 11589775-11598389 Eutrema salsugineum
Thhalv10007886m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11593390-11598389 Eutrema salsugineum
Thhalv10007886m.g 5.0kb downstream 5.0kb downstream 8615 true scaffold_5: 11584775-11593389 Eutrema salsugineum
Thhalv10007886m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11584775-11589774 Eutrema salsugineum
Thhalv10007886m.g 10.0kb upstream 10.0kb upstream 13615 true scaffold_5: 11589775-11603389 Eutrema salsugineum
Thhalv10007886m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11593390-11603389 Eutrema salsugineum
Thhalv10007886m.g 10.0kb downstream 10.0kb downstream 13615 true scaffold_5: 11579775-11593389 Eutrema salsugineum
Thhalv10007886m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11579775-11589774 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363320 5261 Brassicaceae View MSA
123840992 5264 Brassicales-Malvales View MSA
124349569 5266 SBM View MSA
124243895 5268 Malvidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain