Gene : Thhalv10007893m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  2604
Name:  ? Thhalv10007893m.g Secondary Identifier:  ? PAC:20185908
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7574 Eutrema salsugineum pathologic  
Esalsugineum VALDEG-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007893m.g 0.5kb upstream 0.5kb upstream 3722 true scaffold_5: 13597494-13601215 Eutrema salsugineum
Thhalv10007893m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13597494-13597993 Eutrema salsugineum
Thhalv10007893m.g 0.5kb downstream 0.5kb downstream 3722 true scaffold_5: 13597994-13601715 Eutrema salsugineum
Thhalv10007893m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13601216-13601715 Eutrema salsugineum
Thhalv10007893m.g 1.0kb upstream 1.0kb upstream 4222 true scaffold_5: 13596994-13601215 Eutrema salsugineum
Thhalv10007893m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13596994-13597993 Eutrema salsugineum
Thhalv10007893m.g 1.0kb downstream 1.0kb downstream 4222 true scaffold_5: 13597994-13602215 Eutrema salsugineum
Thhalv10007893m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13601216-13602215 Eutrema salsugineum
Thhalv10007893m.g 2.0kb upstream 2.0kb upstream 5222 true scaffold_5: 13595994-13601215 Eutrema salsugineum
Thhalv10007893m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13595994-13597993 Eutrema salsugineum
Thhalv10007893m.g 2.0kb downstream 2.0kb downstream 5222 true scaffold_5: 13597994-13603215 Eutrema salsugineum
Thhalv10007893m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13601216-13603215 Eutrema salsugineum
Thhalv10007893m.g 5.0kb upstream 5.0kb upstream 8222 true scaffold_5: 13592994-13601215 Eutrema salsugineum
Thhalv10007893m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13592994-13597993 Eutrema salsugineum
Thhalv10007893m.g 5.0kb downstream 5.0kb downstream 8222 true scaffold_5: 13597994-13606215 Eutrema salsugineum
Thhalv10007893m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13601216-13606215 Eutrema salsugineum
Thhalv10007893m.g 10.0kb upstream 10.0kb upstream 13222 true scaffold_5: 13587994-13601215 Eutrema salsugineum
Thhalv10007893m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13587994-13597993 Eutrema salsugineum
Thhalv10007893m.g 10.0kb downstream 10.0kb downstream 13222 true scaffold_5: 13597994-13611215 Eutrema salsugineum
Thhalv10007893m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13601216-13611215 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366385 5261 Brassicaceae View MSA
123833395 5264 Brassicales-Malvales View MSA
124342794 5266 SBM View MSA
124237152 5268 Malvidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain