Gene : Thhalv10007846m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11516//PTHR11516:SF38 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR Genomic Order:  944
Name:  ? Thhalv10007846m.g Secondary Identifier:  ? PAC:20185482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5173 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PYRUVDEHYD-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007846m.g 0.5kb upstream 0.5kb upstream 4012 true scaffold_5: 6827721-6831732 Eutrema salsugineum
Thhalv10007846m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6827721-6828220 Eutrema salsugineum
Thhalv10007846m.g 0.5kb downstream 0.5kb downstream 4012 true scaffold_5: 6828221-6832232 Eutrema salsugineum
Thhalv10007846m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6831733-6832232 Eutrema salsugineum
Thhalv10007846m.g 1.0kb upstream 1.0kb upstream 4512 true scaffold_5: 6827221-6831732 Eutrema salsugineum
Thhalv10007846m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6827221-6828220 Eutrema salsugineum
Thhalv10007846m.g 1.0kb downstream 1.0kb downstream 4512 true scaffold_5: 6828221-6832732 Eutrema salsugineum
Thhalv10007846m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6831733-6832732 Eutrema salsugineum
Thhalv10007846m.g 2.0kb upstream 2.0kb upstream 5512 true scaffold_5: 6826221-6831732 Eutrema salsugineum
Thhalv10007846m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6826221-6828220 Eutrema salsugineum
Thhalv10007846m.g 2.0kb downstream 2.0kb downstream 5512 true scaffold_5: 6828221-6833732 Eutrema salsugineum
Thhalv10007846m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6831733-6833732 Eutrema salsugineum
Thhalv10007846m.g 5.0kb upstream 5.0kb upstream 8512 true scaffold_5: 6823221-6831732 Eutrema salsugineum
Thhalv10007846m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6823221-6828220 Eutrema salsugineum
Thhalv10007846m.g 5.0kb downstream 5.0kb downstream 8512 true scaffold_5: 6828221-6836732 Eutrema salsugineum
Thhalv10007846m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6831733-6836732 Eutrema salsugineum
Thhalv10007846m.g 10.0kb upstream 10.0kb upstream 13512 true scaffold_5: 6818221-6831732 Eutrema salsugineum
Thhalv10007846m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6818221-6828220 Eutrema salsugineum
Thhalv10007846m.g 10.0kb downstream 10.0kb downstream 13512 true scaffold_5: 6828221-6841732 Eutrema salsugineum
Thhalv10007846m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6831733-6841732 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374378 5261 Brassicaceae View MSA
123838646 5264 Brassicales-Malvales View MSA
124346461 5266 SBM View MSA
124239887 5268 Malvidae View MSA
124066466 5270 Rosid View MSA
123744027 5271 Pentapetalae View MSA
122788942 5272 Eudicot View MSA
122045712 5273 Angiosperm View MSA
121344698 5274 Embryophyte View MSA
123425832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain