Gene : Thhalv10007477m.g E. salsugineum v1.0
Defline:  (1 of 5) PF00288//PF08544 - GHMP kinases N terminal domain (GHMP_kinases_N) // GHMP kinases C terminal (GHMP_kinases_C) Genomic Order:  286
Name:  ? Thhalv10007477m.g Secondary Identifier:  ? PAC:20185522
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5910 Eutrema salsugineum pathologic  
Esalsugineum PWY-922 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007477m.g 0.5kb upstream 0.5kb upstream 3824 true scaffold_5: 3235210-3239033 Eutrema salsugineum
Thhalv10007477m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3238534-3239033 Eutrema salsugineum
Thhalv10007477m.g 0.5kb downstream 0.5kb downstream 3824 true scaffold_5: 3234710-3238533 Eutrema salsugineum
Thhalv10007477m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3234710-3235209 Eutrema salsugineum
Thhalv10007477m.g 1.0kb upstream 1.0kb upstream 4324 true scaffold_5: 3235210-3239533 Eutrema salsugineum
Thhalv10007477m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3238534-3239533 Eutrema salsugineum
Thhalv10007477m.g 1.0kb downstream 1.0kb downstream 4324 true scaffold_5: 3234210-3238533 Eutrema salsugineum
Thhalv10007477m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3234210-3235209 Eutrema salsugineum
Thhalv10007477m.g 2.0kb upstream 2.0kb upstream 5324 true scaffold_5: 3235210-3240533 Eutrema salsugineum
Thhalv10007477m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3238534-3240533 Eutrema salsugineum
Thhalv10007477m.g 2.0kb downstream 2.0kb downstream 5324 true scaffold_5: 3233210-3238533 Eutrema salsugineum
Thhalv10007477m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3233210-3235209 Eutrema salsugineum
Thhalv10007477m.g 5.0kb upstream 5.0kb upstream 8324 true scaffold_5: 3235210-3243533 Eutrema salsugineum
Thhalv10007477m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3238534-3243533 Eutrema salsugineum
Thhalv10007477m.g 5.0kb downstream 5.0kb downstream 8324 true scaffold_5: 3230210-3238533 Eutrema salsugineum
Thhalv10007477m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3230210-3235209 Eutrema salsugineum
Thhalv10007477m.g 10.0kb upstream 10.0kb upstream 13324 true scaffold_5: 3235210-3248533 Eutrema salsugineum
Thhalv10007477m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3238534-3248533 Eutrema salsugineum
Thhalv10007477m.g 10.0kb downstream 10.0kb downstream 13324 true scaffold_5: 3225210-3238533 Eutrema salsugineum
Thhalv10007477m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3225210-3235209 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365721 5261 Brassicaceae View MSA
123834522 5264 Brassicales-Malvales View MSA
124336505 5266 SBM View MSA
124239577 5268 Malvidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain