Gene : Thhalv10008345m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR35703:SF1 - INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED Genomic Order:  170
Name:  ? Thhalv10008345m.g Secondary Identifier:  ? PAC:20186927
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5874 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008345m.g 0.5kb upstream 0.5kb upstream 2406 true scaffold_5: 2248006-2250411 Eutrema salsugineum
Thhalv10008345m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2248006-2248505 Eutrema salsugineum
Thhalv10008345m.g 0.5kb downstream 0.5kb downstream 2406 true scaffold_5: 2248506-2250911 Eutrema salsugineum
Thhalv10008345m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2250412-2250911 Eutrema salsugineum
Thhalv10008345m.g 1.0kb upstream 1.0kb upstream 2906 true scaffold_5: 2247506-2250411 Eutrema salsugineum
Thhalv10008345m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2247506-2248505 Eutrema salsugineum
Thhalv10008345m.g 1.0kb downstream 1.0kb downstream 2906 true scaffold_5: 2248506-2251411 Eutrema salsugineum
Thhalv10008345m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2250412-2251411 Eutrema salsugineum
Thhalv10008345m.g 2.0kb upstream 2.0kb upstream 3906 true scaffold_5: 2246506-2250411 Eutrema salsugineum
Thhalv10008345m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2246506-2248505 Eutrema salsugineum
Thhalv10008345m.g 2.0kb downstream 2.0kb downstream 3906 true scaffold_5: 2248506-2252411 Eutrema salsugineum
Thhalv10008345m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2250412-2252411 Eutrema salsugineum
Thhalv10008345m.g 5.0kb upstream 5.0kb upstream 6906 true scaffold_5: 2243506-2250411 Eutrema salsugineum
Thhalv10008345m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2243506-2248505 Eutrema salsugineum
Thhalv10008345m.g 5.0kb downstream 5.0kb downstream 6906 true scaffold_5: 2248506-2255411 Eutrema salsugineum
Thhalv10008345m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2250412-2255411 Eutrema salsugineum
Thhalv10008345m.g 10.0kb upstream 10.0kb upstream 11906 true scaffold_5: 2238506-2250411 Eutrema salsugineum
Thhalv10008345m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2238506-2248505 Eutrema salsugineum
Thhalv10008345m.g 10.0kb downstream 10.0kb downstream 11906 true scaffold_5: 2248506-2260411 Eutrema salsugineum
Thhalv10008345m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2250412-2260411 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374362 5261 Brassicaceae View MSA
123837004 5264 Brassicales-Malvales View MSA
124341792 5266 SBM View MSA
124242184 5268 Malvidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain