Gene : Thhalv10007947m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR12694 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 Genomic Order:  2512
Name:  ? Thhalv10007947m.g Secondary Identifier:  ? PAC:20186769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007947m.g 0.5kb upstream 0.5kb upstream 3506 true scaffold_5: 13290094-13293599 Eutrema salsugineum
Thhalv10007947m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13290094-13290593 Eutrema salsugineum
Thhalv10007947m.g 0.5kb downstream 0.5kb downstream 3506 true scaffold_5: 13290594-13294099 Eutrema salsugineum
Thhalv10007947m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13293600-13294099 Eutrema salsugineum
Thhalv10007947m.g 1.0kb upstream 1.0kb upstream 4006 true scaffold_5: 13289594-13293599 Eutrema salsugineum
Thhalv10007947m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13289594-13290593 Eutrema salsugineum
Thhalv10007947m.g 1.0kb downstream 1.0kb downstream 4006 true scaffold_5: 13290594-13294599 Eutrema salsugineum
Thhalv10007947m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13293600-13294599 Eutrema salsugineum
Thhalv10007947m.g 2.0kb upstream 2.0kb upstream 5006 true scaffold_5: 13288594-13293599 Eutrema salsugineum
Thhalv10007947m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13288594-13290593 Eutrema salsugineum
Thhalv10007947m.g 2.0kb downstream 2.0kb downstream 5006 true scaffold_5: 13290594-13295599 Eutrema salsugineum
Thhalv10007947m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13293600-13295599 Eutrema salsugineum
Thhalv10007947m.g 5.0kb upstream 5.0kb upstream 8006 true scaffold_5: 13285594-13293599 Eutrema salsugineum
Thhalv10007947m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13285594-13290593 Eutrema salsugineum
Thhalv10007947m.g 5.0kb downstream 5.0kb downstream 8006 true scaffold_5: 13290594-13298599 Eutrema salsugineum
Thhalv10007947m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13293600-13298599 Eutrema salsugineum
Thhalv10007947m.g 10.0kb upstream 10.0kb upstream 13006 true scaffold_5: 13280594-13293599 Eutrema salsugineum
Thhalv10007947m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13280594-13290593 Eutrema salsugineum
Thhalv10007947m.g 10.0kb downstream 10.0kb downstream 13006 true scaffold_5: 13290594-13303599 Eutrema salsugineum
Thhalv10007947m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13293600-13303599 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378750 5261 Brassicaceae View MSA
123837405 5264 Brassicales-Malvales View MSA
124339227 5266 SBM View MSA
124238901 5268 Malvidae View MSA
124063579 5270 Rosid View MSA
123741700 5271 Pentapetalae View MSA
122797200 5272 Eudicot View MSA
122049718 5273 Angiosperm View MSA
121345222 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain