Gene : Thhalv10008402m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  2474
Name:  ? Thhalv10008402m.g Secondary Identifier:  ? PAC:20186519
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-2261 Eutrema salsugineum pathologic  
Esalsugineum PWY-6959 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008402m.g 0.5kb upstream 0.5kb upstream 2969 true scaffold_5: 13157673-13160641 Eutrema salsugineum
Thhalv10008402m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13160142-13160641 Eutrema salsugineum
Thhalv10008402m.g 0.5kb downstream 0.5kb downstream 2969 true scaffold_5: 13157173-13160141 Eutrema salsugineum
Thhalv10008402m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13157173-13157672 Eutrema salsugineum
Thhalv10008402m.g 1.0kb upstream 1.0kb upstream 3469 true scaffold_5: 13157673-13161141 Eutrema salsugineum
Thhalv10008402m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13160142-13161141 Eutrema salsugineum
Thhalv10008402m.g 1.0kb downstream 1.0kb downstream 3469 true scaffold_5: 13156673-13160141 Eutrema salsugineum
Thhalv10008402m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13156673-13157672 Eutrema salsugineum
Thhalv10008402m.g 2.0kb upstream 2.0kb upstream 4469 true scaffold_5: 13157673-13162141 Eutrema salsugineum
Thhalv10008402m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13160142-13162141 Eutrema salsugineum
Thhalv10008402m.g 2.0kb downstream 2.0kb downstream 4469 true scaffold_5: 13155673-13160141 Eutrema salsugineum
Thhalv10008402m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13155673-13157672 Eutrema salsugineum
Thhalv10008402m.g 5.0kb upstream 5.0kb upstream 7469 true scaffold_5: 13157673-13165141 Eutrema salsugineum
Thhalv10008402m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13160142-13165141 Eutrema salsugineum
Thhalv10008402m.g 5.0kb downstream 5.0kb downstream 7469 true scaffold_5: 13152673-13160141 Eutrema salsugineum
Thhalv10008402m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13152673-13157672 Eutrema salsugineum
Thhalv10008402m.g 10.0kb upstream 10.0kb upstream 12469 true scaffold_5: 13157673-13170141 Eutrema salsugineum
Thhalv10008402m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13160142-13170141 Eutrema salsugineum
Thhalv10008402m.g 10.0kb downstream 10.0kb downstream 12469 true scaffold_5: 13147673-13160141 Eutrema salsugineum
Thhalv10008402m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13147673-13157672 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365618 5261 Brassicaceae View MSA
123839523 5264 Brassicales-Malvales View MSA
124339715 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain