Gene : Thhalv10008369m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  348
Name:  ? Thhalv10008369m.g Secondary Identifier:  ? PAC:20185873
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6121 Eutrema salsugineum pathologic  
Esalsugineum PWY-6613 Eutrema salsugineum pathologic  
Esalsugineum PWY-841 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008369m.g 0.5kb upstream 0.5kb upstream 2538 true scaffold_5: 3706836-3709373 Eutrema salsugineum
Thhalv10008369m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3708874-3709373 Eutrema salsugineum
Thhalv10008369m.g 0.5kb downstream 0.5kb downstream 2538 true scaffold_5: 3706336-3708873 Eutrema salsugineum
Thhalv10008369m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3706336-3706835 Eutrema salsugineum
Thhalv10008369m.g 1.0kb upstream 1.0kb upstream 3038 true scaffold_5: 3706836-3709873 Eutrema salsugineum
Thhalv10008369m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3708874-3709873 Eutrema salsugineum
Thhalv10008369m.g 1.0kb downstream 1.0kb downstream 3038 true scaffold_5: 3705836-3708873 Eutrema salsugineum
Thhalv10008369m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3705836-3706835 Eutrema salsugineum
Thhalv10008369m.g 2.0kb upstream 2.0kb upstream 4038 true scaffold_5: 3706836-3710873 Eutrema salsugineum
Thhalv10008369m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3708874-3710873 Eutrema salsugineum
Thhalv10008369m.g 2.0kb downstream 2.0kb downstream 4038 true scaffold_5: 3704836-3708873 Eutrema salsugineum
Thhalv10008369m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3704836-3706835 Eutrema salsugineum
Thhalv10008369m.g 5.0kb upstream 5.0kb upstream 7038 true scaffold_5: 3706836-3713873 Eutrema salsugineum
Thhalv10008369m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3708874-3713873 Eutrema salsugineum
Thhalv10008369m.g 5.0kb downstream 5.0kb downstream 7038 true scaffold_5: 3701836-3708873 Eutrema salsugineum
Thhalv10008369m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3701836-3706835 Eutrema salsugineum
Thhalv10008369m.g 10.0kb upstream 10.0kb upstream 12038 true scaffold_5: 3706836-3718873 Eutrema salsugineum
Thhalv10008369m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3708874-3718873 Eutrema salsugineum
Thhalv10008369m.g 10.0kb downstream 10.0kb downstream 12038 true scaffold_5: 3696836-3708873 Eutrema salsugineum
Thhalv10008369m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3696836-3706835 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370229 5261 Brassicaceae View MSA
123835311 5264 Brassicales-Malvales View MSA
124339680 5266 SBM View MSA
124244767 5268 Malvidae View MSA
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain