Gene : Thhalv10009443m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  173
Name:  ? Thhalv10009443m.g Secondary Identifier:  ? PAC:20188496
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009443m.g 0.5kb upstream 0.5kb upstream 1154 true scaffold_5: 2263935-2265088 Eutrema salsugineum
Thhalv10009443m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2264589-2265088 Eutrema salsugineum
Thhalv10009443m.g 0.5kb downstream 0.5kb downstream 1154 true scaffold_5: 2263435-2264588 Eutrema salsugineum
Thhalv10009443m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2263435-2263934 Eutrema salsugineum
Thhalv10009443m.g 1.0kb upstream 1.0kb upstream 1654 true scaffold_5: 2263935-2265588 Eutrema salsugineum
Thhalv10009443m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2264589-2265588 Eutrema salsugineum
Thhalv10009443m.g 1.0kb downstream 1.0kb downstream 1654 true scaffold_5: 2262935-2264588 Eutrema salsugineum
Thhalv10009443m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2262935-2263934 Eutrema salsugineum
Thhalv10009443m.g 2.0kb upstream 2.0kb upstream 2654 true scaffold_5: 2263935-2266588 Eutrema salsugineum
Thhalv10009443m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2264589-2266588 Eutrema salsugineum
Thhalv10009443m.g 2.0kb downstream 2.0kb downstream 2654 true scaffold_5: 2261935-2264588 Eutrema salsugineum
Thhalv10009443m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2261935-2263934 Eutrema salsugineum
Thhalv10009443m.g 5.0kb upstream 5.0kb upstream 5654 true scaffold_5: 2263935-2269588 Eutrema salsugineum
Thhalv10009443m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2264589-2269588 Eutrema salsugineum
Thhalv10009443m.g 5.0kb downstream 5.0kb downstream 5654 true scaffold_5: 2258935-2264588 Eutrema salsugineum
Thhalv10009443m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2258935-2263934 Eutrema salsugineum
Thhalv10009443m.g 10.0kb upstream 10.0kb upstream 10654 true scaffold_5: 2263935-2274588 Eutrema salsugineum
Thhalv10009443m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2264589-2274588 Eutrema salsugineum
Thhalv10009443m.g 10.0kb downstream 10.0kb downstream 10654 true scaffold_5: 2253935-2264588 Eutrema salsugineum
Thhalv10009443m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2253935-2263934 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379506 5261 Brassicaceae View MSA
123835927 5264 Brassicales-Malvales View MSA
124322107 5266 SBM View MSA
124251643 5268 Malvidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain