Gene : Thhalv10009447m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  2763
Name:  ? Thhalv10009447m.g Secondary Identifier:  ? PAC:20188487
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009447m.g 0.5kb upstream 0.5kb upstream 1743 true scaffold_5: 14217152-14218894 Eutrema salsugineum
Thhalv10009447m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 14217152-14217651 Eutrema salsugineum
Thhalv10009447m.g 0.5kb downstream 0.5kb downstream 1743 true scaffold_5: 14217652-14219394 Eutrema salsugineum
Thhalv10009447m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 14218895-14219394 Eutrema salsugineum
Thhalv10009447m.g 1.0kb upstream 1.0kb upstream 2243 true scaffold_5: 14216652-14218894 Eutrema salsugineum
Thhalv10009447m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 14216652-14217651 Eutrema salsugineum
Thhalv10009447m.g 1.0kb downstream 1.0kb downstream 2243 true scaffold_5: 14217652-14219894 Eutrema salsugineum
Thhalv10009447m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 14218895-14219894 Eutrema salsugineum
Thhalv10009447m.g 2.0kb upstream 2.0kb upstream 3243 true scaffold_5: 14215652-14218894 Eutrema salsugineum
Thhalv10009447m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 14215652-14217651 Eutrema salsugineum
Thhalv10009447m.g 2.0kb downstream 2.0kb downstream 3243 true scaffold_5: 14217652-14220894 Eutrema salsugineum
Thhalv10009447m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 14218895-14220894 Eutrema salsugineum
Thhalv10009447m.g 5.0kb upstream 5.0kb upstream 6243 true scaffold_5: 14212652-14218894 Eutrema salsugineum
Thhalv10009447m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 14212652-14217651 Eutrema salsugineum
Thhalv10009447m.g 5.0kb downstream 5.0kb downstream 6243 true scaffold_5: 14217652-14223894 Eutrema salsugineum
Thhalv10009447m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 14218895-14223894 Eutrema salsugineum
Thhalv10009447m.g 10.0kb upstream 10.0kb upstream 11243 true scaffold_5: 14207652-14218894 Eutrema salsugineum
Thhalv10009447m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 14207652-14217651 Eutrema salsugineum
Thhalv10009447m.g 10.0kb downstream 10.0kb downstream 11243 true scaffold_5: 14217652-14228894 Eutrema salsugineum
Thhalv10009447m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 14218895-14228894 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358841 5261 Brassicaceae Singleton cluster - no MSA
123796760 5264 Brassicales-Malvales Singleton cluster - no MSA
124294499 5266 SBM Singleton cluster - no MSA
124250415 5268 Malvidae View MSA
123952501 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain