Gene : Thhalv10009515m.g E. salsugineum v1.0
Defline:  (1 of 4) 3.2.2.22 - rRNA N-glycosylase / rRNA N-glycosidase Genomic Order:  2116
Name:  ? Thhalv10009515m.g Secondary Identifier:  ? PAC:20188209
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009515m.g 0.5kb upstream 0.5kb upstream 1441 true scaffold_5: 11701284-11702724 Eutrema salsugineum
Thhalv10009515m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11702225-11702724 Eutrema salsugineum
Thhalv10009515m.g 0.5kb downstream 0.5kb downstream 1441 true scaffold_5: 11700784-11702224 Eutrema salsugineum
Thhalv10009515m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11700784-11701283 Eutrema salsugineum
Thhalv10009515m.g 1.0kb upstream 1.0kb upstream 1941 true scaffold_5: 11701284-11703224 Eutrema salsugineum
Thhalv10009515m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11702225-11703224 Eutrema salsugineum
Thhalv10009515m.g 1.0kb downstream 1.0kb downstream 1941 true scaffold_5: 11700284-11702224 Eutrema salsugineum
Thhalv10009515m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11700284-11701283 Eutrema salsugineum
Thhalv10009515m.g 2.0kb upstream 2.0kb upstream 2941 true scaffold_5: 11701284-11704224 Eutrema salsugineum
Thhalv10009515m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11702225-11704224 Eutrema salsugineum
Thhalv10009515m.g 2.0kb downstream 2.0kb downstream 2941 true scaffold_5: 11699284-11702224 Eutrema salsugineum
Thhalv10009515m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11699284-11701283 Eutrema salsugineum
Thhalv10009515m.g 5.0kb upstream 5.0kb upstream 5941 true scaffold_5: 11701284-11707224 Eutrema salsugineum
Thhalv10009515m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11702225-11707224 Eutrema salsugineum
Thhalv10009515m.g 5.0kb downstream 5.0kb downstream 5941 true scaffold_5: 11696284-11702224 Eutrema salsugineum
Thhalv10009515m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11696284-11701283 Eutrema salsugineum
Thhalv10009515m.g 10.0kb upstream 10.0kb upstream 10941 true scaffold_5: 11701284-11712224 Eutrema salsugineum
Thhalv10009515m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11702225-11712224 Eutrema salsugineum
Thhalv10009515m.g 10.0kb downstream 10.0kb downstream 10941 true scaffold_5: 11691284-11702224 Eutrema salsugineum
Thhalv10009515m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11691284-11701283 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379390 5261 Brassicaceae View MSA
123802243 5264 Brassicales-Malvales View MSA
124349658 5266 SBM View MSA
124251807 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain