Gene : Thhalv10009484m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  2835
Name:  ? Thhalv10009484m.g Secondary Identifier:  ? PAC:20186173
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009484m.g 0.5kb upstream 0.5kb upstream 1983 true scaffold_5: 14518508-14520490 Eutrema salsugineum
Thhalv10009484m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 14519991-14520490 Eutrema salsugineum
Thhalv10009484m.g 0.5kb downstream 0.5kb downstream 1983 true scaffold_5: 14518008-14519990 Eutrema salsugineum
Thhalv10009484m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 14518008-14518507 Eutrema salsugineum
Thhalv10009484m.g 1.0kb upstream 1.0kb upstream 2483 true scaffold_5: 14518508-14520990 Eutrema salsugineum
Thhalv10009484m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 14519991-14520990 Eutrema salsugineum
Thhalv10009484m.g 1.0kb downstream 1.0kb downstream 2483 true scaffold_5: 14517508-14519990 Eutrema salsugineum
Thhalv10009484m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 14517508-14518507 Eutrema salsugineum
Thhalv10009484m.g 2.0kb upstream 2.0kb upstream 3483 true scaffold_5: 14518508-14521990 Eutrema salsugineum
Thhalv10009484m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 14519991-14521990 Eutrema salsugineum
Thhalv10009484m.g 2.0kb downstream 2.0kb downstream 3483 true scaffold_5: 14516508-14519990 Eutrema salsugineum
Thhalv10009484m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 14516508-14518507 Eutrema salsugineum
Thhalv10009484m.g 5.0kb upstream 5.0kb upstream 6483 true scaffold_5: 14518508-14524990 Eutrema salsugineum
Thhalv10009484m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 14519991-14524990 Eutrema salsugineum
Thhalv10009484m.g 5.0kb downstream 5.0kb downstream 6483 true scaffold_5: 14513508-14519990 Eutrema salsugineum
Thhalv10009484m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 14513508-14518507 Eutrema salsugineum
Thhalv10009484m.g 10.0kb upstream 10.0kb upstream 11483 true scaffold_5: 14518508-14529990 Eutrema salsugineum
Thhalv10009484m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 14519991-14529990 Eutrema salsugineum
Thhalv10009484m.g 10.0kb downstream 10.0kb downstream 11483 true scaffold_5: 14508508-14519990 Eutrema salsugineum
Thhalv10009484m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 14508508-14518507 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361741 5261 Brassicaceae View MSA
123798237 5264 Brassicales-Malvales View MSA
124295905 5266 SBM View MSA
124148212 5268 Malvidae View MSA
123874256 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain