Gene : Thhalv10008979m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  2550
Name:  ? Thhalv10008979m.g Secondary Identifier:  ? PAC:20188597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008979m.g 0.5kb upstream 0.5kb upstream 2878 true scaffold_5: 13404530-13407407 Eutrema salsugineum
Thhalv10008979m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13406908-13407407 Eutrema salsugineum
Thhalv10008979m.g 0.5kb downstream 0.5kb downstream 2878 true scaffold_5: 13404030-13406907 Eutrema salsugineum
Thhalv10008979m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13404030-13404529 Eutrema salsugineum
Thhalv10008979m.g 1.0kb upstream 1.0kb upstream 3378 true scaffold_5: 13404530-13407907 Eutrema salsugineum
Thhalv10008979m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13406908-13407907 Eutrema salsugineum
Thhalv10008979m.g 1.0kb downstream 1.0kb downstream 3378 true scaffold_5: 13403530-13406907 Eutrema salsugineum
Thhalv10008979m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13403530-13404529 Eutrema salsugineum
Thhalv10008979m.g 2.0kb upstream 2.0kb upstream 4378 true scaffold_5: 13404530-13408907 Eutrema salsugineum
Thhalv10008979m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13406908-13408907 Eutrema salsugineum
Thhalv10008979m.g 2.0kb downstream 2.0kb downstream 4378 true scaffold_5: 13402530-13406907 Eutrema salsugineum
Thhalv10008979m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13402530-13404529 Eutrema salsugineum
Thhalv10008979m.g 5.0kb upstream 5.0kb upstream 7378 true scaffold_5: 13404530-13411907 Eutrema salsugineum
Thhalv10008979m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13406908-13411907 Eutrema salsugineum
Thhalv10008979m.g 5.0kb downstream 5.0kb downstream 7378 true scaffold_5: 13399530-13406907 Eutrema salsugineum
Thhalv10008979m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13399530-13404529 Eutrema salsugineum
Thhalv10008979m.g 10.0kb upstream 10.0kb upstream 12378 true scaffold_5: 13404530-13416907 Eutrema salsugineum
Thhalv10008979m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13406908-13416907 Eutrema salsugineum
Thhalv10008979m.g 10.0kb downstream 10.0kb downstream 12378 true scaffold_5: 13394530-13406907 Eutrema salsugineum
Thhalv10008979m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13394530-13404529 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368099 5261 Brassicaceae View MSA
123829040 5264 Brassicales-Malvales View MSA
124346592 5266 SBM View MSA
124244081 5268 Malvidae View MSA
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain