Gene : Thhalv10008965m.g E. salsugineum v1.0

Defline:  (1 of 3) PTHR12612 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  728
Name:  ? Thhalv10008965m.g Secondary Identifier:  ? PAC:20187414

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008965m.g 0.5kb upstream 0.5kb upstream 2238 true scaffold_5: 5849080-5851317 Eutrema salsugineum
Thhalv10008965m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5849080-5849579 Eutrema salsugineum
Thhalv10008965m.g 0.5kb downstream 0.5kb downstream 2238 true scaffold_5: 5849580-5851817 Eutrema salsugineum
Thhalv10008965m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5851318-5851817 Eutrema salsugineum
Thhalv10008965m.g 1.0kb upstream 1.0kb upstream 2738 true scaffold_5: 5848580-5851317 Eutrema salsugineum
Thhalv10008965m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5848580-5849579 Eutrema salsugineum
Thhalv10008965m.g 1.0kb downstream 1.0kb downstream 2738 true scaffold_5: 5849580-5852317 Eutrema salsugineum
Thhalv10008965m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5851318-5852317 Eutrema salsugineum
Thhalv10008965m.g 2.0kb upstream 2.0kb upstream 3738 true scaffold_5: 5847580-5851317 Eutrema salsugineum
Thhalv10008965m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5847580-5849579 Eutrema salsugineum
Thhalv10008965m.g 2.0kb downstream 2.0kb downstream 3738 true scaffold_5: 5849580-5853317 Eutrema salsugineum
Thhalv10008965m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5851318-5853317 Eutrema salsugineum
Thhalv10008965m.g 5.0kb upstream 5.0kb upstream 6738 true scaffold_5: 5844580-5851317 Eutrema salsugineum
Thhalv10008965m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5844580-5849579 Eutrema salsugineum
Thhalv10008965m.g 5.0kb downstream 5.0kb downstream 6738 true scaffold_5: 5849580-5856317 Eutrema salsugineum
Thhalv10008965m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5851318-5856317 Eutrema salsugineum
Thhalv10008965m.g 10.0kb upstream 10.0kb upstream 11738 true scaffold_5: 5839580-5851317 Eutrema salsugineum
Thhalv10008965m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5839580-5849579 Eutrema salsugineum
Thhalv10008965m.g 10.0kb downstream 10.0kb downstream 11738 true scaffold_5: 5849580-5861317 Eutrema salsugineum
Thhalv10008965m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5851318-5861317 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358744 5261 Brassicaceae Singleton cluster - no MSA
123838890 5264 Brassicales-Malvales View MSA
124346465 5266 SBM View MSA
124239660 5268 Malvidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain