Gene : Thhalv10009078m.g E. salsugineum v1.0
Defline:  (1 of 2) KOG3172 - Small nuclear ribonucleoprotein Sm D3 Genomic Order:  1268
Name:  ? Thhalv10009078m.g Secondary Identifier:  ? PAC:20188109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009078m.g 0.5kb upstream 0.5kb upstream 2159 true scaffold_5: 8415640-8417798 Eutrema salsugineum
Thhalv10009078m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8417299-8417798 Eutrema salsugineum
Thhalv10009078m.g 0.5kb downstream 0.5kb downstream 2159 true scaffold_5: 8415140-8417298 Eutrema salsugineum
Thhalv10009078m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8415140-8415639 Eutrema salsugineum
Thhalv10009078m.g 1.0kb upstream 1.0kb upstream 2659 true scaffold_5: 8415640-8418298 Eutrema salsugineum
Thhalv10009078m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8417299-8418298 Eutrema salsugineum
Thhalv10009078m.g 1.0kb downstream 1.0kb downstream 2659 true scaffold_5: 8414640-8417298 Eutrema salsugineum
Thhalv10009078m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8414640-8415639 Eutrema salsugineum
Thhalv10009078m.g 2.0kb upstream 2.0kb upstream 3659 true scaffold_5: 8415640-8419298 Eutrema salsugineum
Thhalv10009078m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8417299-8419298 Eutrema salsugineum
Thhalv10009078m.g 2.0kb downstream 2.0kb downstream 3659 true scaffold_5: 8413640-8417298 Eutrema salsugineum
Thhalv10009078m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8413640-8415639 Eutrema salsugineum
Thhalv10009078m.g 5.0kb upstream 5.0kb upstream 6659 true scaffold_5: 8415640-8422298 Eutrema salsugineum
Thhalv10009078m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8417299-8422298 Eutrema salsugineum
Thhalv10009078m.g 5.0kb downstream 5.0kb downstream 6659 true scaffold_5: 8410640-8417298 Eutrema salsugineum
Thhalv10009078m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8410640-8415639 Eutrema salsugineum
Thhalv10009078m.g 10.0kb upstream 10.0kb upstream 11659 true scaffold_5: 8415640-8427298 Eutrema salsugineum
Thhalv10009078m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8417299-8427298 Eutrema salsugineum
Thhalv10009078m.g 10.0kb downstream 10.0kb downstream 11659 true scaffold_5: 8405640-8417298 Eutrema salsugineum
Thhalv10009078m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8405640-8415639 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372891 5261 Brassicaceae View MSA
123838882 5264 Brassicales-Malvales View MSA
124338076 5266 SBM View MSA
124243625 5268 Malvidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain