Gene : Thhalv10010013m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  2792
Name:  ? Thhalv10010013m.g Secondary Identifier:  ? PAC:20186234
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010013m.g 0.5kb upstream 0.5kb upstream 2282 true scaffold_5: 14340653-14342934 Eutrema salsugineum
Thhalv10010013m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 14342435-14342934 Eutrema salsugineum
Thhalv10010013m.g 0.5kb downstream 0.5kb downstream 2282 true scaffold_5: 14340153-14342434 Eutrema salsugineum
Thhalv10010013m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 14340153-14340652 Eutrema salsugineum
Thhalv10010013m.g 1.0kb upstream 1.0kb upstream 2782 true scaffold_5: 14340653-14343434 Eutrema salsugineum
Thhalv10010013m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 14342435-14343434 Eutrema salsugineum
Thhalv10010013m.g 1.0kb downstream 1.0kb downstream 2782 true scaffold_5: 14339653-14342434 Eutrema salsugineum
Thhalv10010013m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 14339653-14340652 Eutrema salsugineum
Thhalv10010013m.g 2.0kb upstream 2.0kb upstream 3782 true scaffold_5: 14340653-14344434 Eutrema salsugineum
Thhalv10010013m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 14342435-14344434 Eutrema salsugineum
Thhalv10010013m.g 2.0kb downstream 2.0kb downstream 3782 true scaffold_5: 14338653-14342434 Eutrema salsugineum
Thhalv10010013m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 14338653-14340652 Eutrema salsugineum
Thhalv10010013m.g 5.0kb upstream 5.0kb upstream 6782 true scaffold_5: 14340653-14347434 Eutrema salsugineum
Thhalv10010013m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 14342435-14347434 Eutrema salsugineum
Thhalv10010013m.g 5.0kb downstream 5.0kb downstream 6782 true scaffold_5: 14335653-14342434 Eutrema salsugineum
Thhalv10010013m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 14335653-14340652 Eutrema salsugineum
Thhalv10010013m.g 10.0kb upstream 10.0kb upstream 11782 true scaffold_5: 14340653-14352434 Eutrema salsugineum
Thhalv10010013m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 14342435-14352434 Eutrema salsugineum
Thhalv10010013m.g 10.0kb downstream 10.0kb downstream 11782 true scaffold_5: 14330653-14342434 Eutrema salsugineum
Thhalv10010013m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 14330653-14340652 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370528 5261 Brassicaceae View MSA
123827835 5264 Brassicales-Malvales View MSA
124337089 5266 SBM View MSA
124242523 5268 Malvidae View MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain