Gene : Thhalv10003524m.g E. salsugineum v1.0
Defline:  (1 of 2) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  1172
Name:  ? Thhalv10003524m.g Secondary Identifier:  ? PAC:20199314
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003524m.g 0.5kb upstream 0.5kb upstream 9726 true scaffold_6: 4773343-4783068 Eutrema salsugineum
Thhalv10003524m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4773343-4773842 Eutrema salsugineum
Thhalv10003524m.g 0.5kb downstream 0.5kb downstream 9726 true scaffold_6: 4773843-4783568 Eutrema salsugineum
Thhalv10003524m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4783069-4783568 Eutrema salsugineum
Thhalv10003524m.g 1.0kb upstream 1.0kb upstream 10226 true scaffold_6: 4772843-4783068 Eutrema salsugineum
Thhalv10003524m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4772843-4773842 Eutrema salsugineum
Thhalv10003524m.g 1.0kb downstream 1.0kb downstream 10226 true scaffold_6: 4773843-4784068 Eutrema salsugineum
Thhalv10003524m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4783069-4784068 Eutrema salsugineum
Thhalv10003524m.g 2.0kb upstream 2.0kb upstream 11226 true scaffold_6: 4771843-4783068 Eutrema salsugineum
Thhalv10003524m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4771843-4773842 Eutrema salsugineum
Thhalv10003524m.g 2.0kb downstream 2.0kb downstream 11226 true scaffold_6: 4773843-4785068 Eutrema salsugineum
Thhalv10003524m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4783069-4785068 Eutrema salsugineum
Thhalv10003524m.g 5.0kb upstream 5.0kb upstream 14226 true scaffold_6: 4768843-4783068 Eutrema salsugineum
Thhalv10003524m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4768843-4773842 Eutrema salsugineum
Thhalv10003524m.g 5.0kb downstream 5.0kb downstream 14226 true scaffold_6: 4773843-4788068 Eutrema salsugineum
Thhalv10003524m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4783069-4788068 Eutrema salsugineum
Thhalv10003524m.g 10.0kb upstream 10.0kb upstream 19226 true scaffold_6: 4763843-4783068 Eutrema salsugineum
Thhalv10003524m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4763843-4773842 Eutrema salsugineum
Thhalv10003524m.g 10.0kb downstream 10.0kb downstream 19226 true scaffold_6: 4773843-4793068 Eutrema salsugineum
Thhalv10003524m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4783069-4793068 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360799 5261 Brassicaceae View MSA
123829224 5264 Brassicales-Malvales View MSA
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain