Gene : Thhalv10009671m.g E. salsugineum v1.0

Defline:  (1 of 1) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1
Name:  ? Thhalv10009671m.g Secondary Identifier:  ? PAC:20188688

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009671m.g 0.5kb upstream 0.5kb upstream 1834 true scaffold_5: 1861-3694 Eutrema salsugineum
Thhalv10009671m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1861-2360 Eutrema salsugineum
Thhalv10009671m.g 0.5kb downstream 0.5kb downstream 1834 true scaffold_5: 2361-4194 Eutrema salsugineum
Thhalv10009671m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3695-4194 Eutrema salsugineum
Thhalv10009671m.g 1.0kb upstream 1.0kb upstream 2334 true scaffold_5: 1361-3694 Eutrema salsugineum
Thhalv10009671m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1361-2360 Eutrema salsugineum
Thhalv10009671m.g 1.0kb downstream 1.0kb downstream 2334 true scaffold_5: 2361-4694 Eutrema salsugineum
Thhalv10009671m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3695-4694 Eutrema salsugineum
Thhalv10009671m.g 2.0kb upstream 2.0kb upstream 3334 true scaffold_5: 361-3694 Eutrema salsugineum
Thhalv10009671m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 361-2360 Eutrema salsugineum
Thhalv10009671m.g 2.0kb downstream 2.0kb downstream 3334 true scaffold_5: 2361-5694 Eutrema salsugineum
Thhalv10009671m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3695-5694 Eutrema salsugineum
Thhalv10009671m.g 5.0kb upstream 5.0kb upstream 3694 true scaffold_5: 1-3694 Eutrema salsugineum
Thhalv10009671m.g 5.0kb upstream 5.0kb upstream 2360 false scaffold_5: 1-2360 Eutrema salsugineum
Thhalv10009671m.g 5.0kb downstream 5.0kb downstream 6334 true scaffold_5: 2361-8694 Eutrema salsugineum
Thhalv10009671m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3695-8694 Eutrema salsugineum
Thhalv10009671m.g 10.0kb upstream 10.0kb upstream 3694 true scaffold_5: 1-3694 Eutrema salsugineum
Thhalv10009671m.g 10.0kb upstream 10.0kb upstream 2360 false scaffold_5: 1-2360 Eutrema salsugineum
Thhalv10009671m.g 10.0kb downstream 10.0kb downstream 11334 true scaffold_5: 2361-13694 Eutrema salsugineum
Thhalv10009671m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3695-13694 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358854 5261 Brassicaceae Singleton cluster - no MSA
123796772 5264 Brassicales-Malvales Singleton cluster - no MSA
124294511 5266 SBM Singleton cluster - no MSA
124250412 5268 Malvidae View MSA
124050165 5270 Rosid View MSA
123752339 5271 Pentapetalae View MSA
122789611 5272 Eudicot View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain