Gene : Thhalv10009887m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN Genomic Order:  893
Name:  ? Thhalv10009887m.g Secondary Identifier:  ? PAC:20186420
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009887m.g 0.5kb upstream 0.5kb upstream 1154 true scaffold_5: 6562049-6563202 Eutrema salsugineum
Thhalv10009887m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6562703-6563202 Eutrema salsugineum
Thhalv10009887m.g 0.5kb downstream 0.5kb downstream 1154 true scaffold_5: 6561549-6562702 Eutrema salsugineum
Thhalv10009887m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6561549-6562048 Eutrema salsugineum
Thhalv10009887m.g 1.0kb upstream 1.0kb upstream 1654 true scaffold_5: 6562049-6563702 Eutrema salsugineum
Thhalv10009887m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6562703-6563702 Eutrema salsugineum
Thhalv10009887m.g 1.0kb downstream 1.0kb downstream 1654 true scaffold_5: 6561049-6562702 Eutrema salsugineum
Thhalv10009887m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6561049-6562048 Eutrema salsugineum
Thhalv10009887m.g 2.0kb upstream 2.0kb upstream 2654 true scaffold_5: 6562049-6564702 Eutrema salsugineum
Thhalv10009887m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6562703-6564702 Eutrema salsugineum
Thhalv10009887m.g 2.0kb downstream 2.0kb downstream 2654 true scaffold_5: 6560049-6562702 Eutrema salsugineum
Thhalv10009887m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6560049-6562048 Eutrema salsugineum
Thhalv10009887m.g 5.0kb upstream 5.0kb upstream 5654 true scaffold_5: 6562049-6567702 Eutrema salsugineum
Thhalv10009887m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6562703-6567702 Eutrema salsugineum
Thhalv10009887m.g 5.0kb downstream 5.0kb downstream 5654 true scaffold_5: 6557049-6562702 Eutrema salsugineum
Thhalv10009887m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6557049-6562048 Eutrema salsugineum
Thhalv10009887m.g 10.0kb upstream 10.0kb upstream 10654 true scaffold_5: 6562049-6572702 Eutrema salsugineum
Thhalv10009887m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6562703-6572702 Eutrema salsugineum
Thhalv10009887m.g 10.0kb downstream 10.0kb downstream 10654 true scaffold_5: 6552049-6562702 Eutrema salsugineum
Thhalv10009887m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6552049-6562048 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363890 5261 Brassicaceae View MSA
123837934 5264 Brassicales-Malvales View MSA
124337851 5266 SBM View MSA
124240205 5268 Malvidae View MSA
124061034 5270 Rosid View MSA
123749515 5271 Pentapetalae View MSA
122792844 5272 Eudicot View MSA
122052093 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121312953 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain