Gene : Thhalv10003846m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23118:SF6 - ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 1 Genomic Order:  1136
Name:  ? Thhalv10003846m.g Secondary Identifier:  ? PAC:20198401
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5172 Eutrema salsugineum pathologic  
Esalsugineum PWY-5173 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003846m.g 0.5kb upstream 0.5kb upstream 4570 true scaffold_6: 4597183-4601752 Eutrema salsugineum
Thhalv10003846m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4601253-4601752 Eutrema salsugineum
Thhalv10003846m.g 0.5kb downstream 0.5kb downstream 4570 true scaffold_6: 4596683-4601252 Eutrema salsugineum
Thhalv10003846m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4596683-4597182 Eutrema salsugineum
Thhalv10003846m.g 1.0kb upstream 1.0kb upstream 5070 true scaffold_6: 4597183-4602252 Eutrema salsugineum
Thhalv10003846m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4601253-4602252 Eutrema salsugineum
Thhalv10003846m.g 1.0kb downstream 1.0kb downstream 5070 true scaffold_6: 4596183-4601252 Eutrema salsugineum
Thhalv10003846m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4596183-4597182 Eutrema salsugineum
Thhalv10003846m.g 2.0kb upstream 2.0kb upstream 6070 true scaffold_6: 4597183-4603252 Eutrema salsugineum
Thhalv10003846m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4601253-4603252 Eutrema salsugineum
Thhalv10003846m.g 2.0kb downstream 2.0kb downstream 6070 true scaffold_6: 4595183-4601252 Eutrema salsugineum
Thhalv10003846m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4595183-4597182 Eutrema salsugineum
Thhalv10003846m.g 5.0kb upstream 5.0kb upstream 9070 true scaffold_6: 4597183-4606252 Eutrema salsugineum
Thhalv10003846m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4601253-4606252 Eutrema salsugineum
Thhalv10003846m.g 5.0kb downstream 5.0kb downstream 9070 true scaffold_6: 4592183-4601252 Eutrema salsugineum
Thhalv10003846m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4592183-4597182 Eutrema salsugineum
Thhalv10003846m.g 10.0kb upstream 10.0kb upstream 14070 true scaffold_6: 4597183-4611252 Eutrema salsugineum
Thhalv10003846m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4601253-4611252 Eutrema salsugineum
Thhalv10003846m.g 10.0kb downstream 10.0kb downstream 14070 true scaffold_6: 4587183-4601252 Eutrema salsugineum
Thhalv10003846m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4587183-4597182 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366583 5261 Brassicaceae View MSA
123838155 5264 Brassicales-Malvales View MSA
124340506 5266 SBM View MSA
124250755 5268 Malvidae View MSA
124062088 5270 Rosid View MSA
123736971 5271 Pentapetalae View MSA
122787632 5272 Eudicot View MSA
122045238 5273 Angiosperm View MSA
121345896 5274 Embryophyte View MSA
123427786 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain