Gene : Thhalv10003896m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10666:SF135 - F15I1.6 PROTEIN-RELATED Genomic Order:  789
Name:  ? Thhalv10003896m.g Secondary Identifier:  ? PAC:20199170
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6351 Eutrema salsugineum pathologic  
Esalsugineum PWY-6352 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003896m.g 0.5kb upstream 0.5kb upstream 4291 true scaffold_6: 3112822-3117112 Eutrema salsugineum
Thhalv10003896m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3116613-3117112 Eutrema salsugineum
Thhalv10003896m.g 0.5kb downstream 0.5kb downstream 4291 true scaffold_6: 3112322-3116612 Eutrema salsugineum
Thhalv10003896m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3112322-3112821 Eutrema salsugineum
Thhalv10003896m.g 1.0kb upstream 1.0kb upstream 4791 true scaffold_6: 3112822-3117612 Eutrema salsugineum
Thhalv10003896m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3116613-3117612 Eutrema salsugineum
Thhalv10003896m.g 1.0kb downstream 1.0kb downstream 4791 true scaffold_6: 3111822-3116612 Eutrema salsugineum
Thhalv10003896m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3111822-3112821 Eutrema salsugineum
Thhalv10003896m.g 2.0kb upstream 2.0kb upstream 5791 true scaffold_6: 3112822-3118612 Eutrema salsugineum
Thhalv10003896m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3116613-3118612 Eutrema salsugineum
Thhalv10003896m.g 2.0kb downstream 2.0kb downstream 5791 true scaffold_6: 3110822-3116612 Eutrema salsugineum
Thhalv10003896m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3110822-3112821 Eutrema salsugineum
Thhalv10003896m.g 5.0kb upstream 5.0kb upstream 8791 true scaffold_6: 3112822-3121612 Eutrema salsugineum
Thhalv10003896m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3116613-3121612 Eutrema salsugineum
Thhalv10003896m.g 5.0kb downstream 5.0kb downstream 8791 true scaffold_6: 3107822-3116612 Eutrema salsugineum
Thhalv10003896m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3107822-3112821 Eutrema salsugineum
Thhalv10003896m.g 10.0kb upstream 10.0kb upstream 13791 true scaffold_6: 3112822-3126612 Eutrema salsugineum
Thhalv10003896m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3116613-3126612 Eutrema salsugineum
Thhalv10003896m.g 10.0kb downstream 10.0kb downstream 13791 true scaffold_6: 3102822-3116612 Eutrema salsugineum
Thhalv10003896m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3102822-3112821 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370293 5261 Brassicaceae View MSA
123840083 5264 Brassicales-Malvales View MSA
124348699 5266 SBM View MSA
124242483 5268 Malvidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain