Gene : Thhalv10003890m.g E. salsugineum v1.0
Defline:  (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase Genomic Order:  266
Name:  ? Thhalv10003890m.g Secondary Identifier:  ? PAC:20198462
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ASPARAGINE-BIOSYNTHESIS Eutrema salsugineum pathologic  
Esalsugineum ASPARAGINESYN-PWY Eutrema salsugineum pathologic  
Esalsugineum CITRULBIO-PWY Eutrema salsugineum pathologic  
Esalsugineum GLUTAMINDEG-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY0-1325 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003890m.g 0.5kb upstream 0.5kb upstream 4022 true scaffold_6: 1053459-1057480 Eutrema salsugineum
Thhalv10003890m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1056981-1057480 Eutrema salsugineum
Thhalv10003890m.g 0.5kb downstream 0.5kb downstream 4022 true scaffold_6: 1052959-1056980 Eutrema salsugineum
Thhalv10003890m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1052959-1053458 Eutrema salsugineum
Thhalv10003890m.g 1.0kb upstream 1.0kb upstream 4522 true scaffold_6: 1053459-1057980 Eutrema salsugineum
Thhalv10003890m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1056981-1057980 Eutrema salsugineum
Thhalv10003890m.g 1.0kb downstream 1.0kb downstream 4522 true scaffold_6: 1052459-1056980 Eutrema salsugineum
Thhalv10003890m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1052459-1053458 Eutrema salsugineum
Thhalv10003890m.g 2.0kb upstream 2.0kb upstream 5522 true scaffold_6: 1053459-1058980 Eutrema salsugineum
Thhalv10003890m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1056981-1058980 Eutrema salsugineum
Thhalv10003890m.g 2.0kb downstream 2.0kb downstream 5522 true scaffold_6: 1051459-1056980 Eutrema salsugineum
Thhalv10003890m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1051459-1053458 Eutrema salsugineum
Thhalv10003890m.g 5.0kb upstream 5.0kb upstream 8522 true scaffold_6: 1053459-1061980 Eutrema salsugineum
Thhalv10003890m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1056981-1061980 Eutrema salsugineum
Thhalv10003890m.g 5.0kb downstream 5.0kb downstream 8522 true scaffold_6: 1048459-1056980 Eutrema salsugineum
Thhalv10003890m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1048459-1053458 Eutrema salsugineum
Thhalv10003890m.g 10.0kb upstream 10.0kb upstream 13522 true scaffold_6: 1053459-1066980 Eutrema salsugineum
Thhalv10003890m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1056981-1066980 Eutrema salsugineum
Thhalv10003890m.g 10.0kb downstream 10.0kb downstream 13522 true scaffold_6: 1043459-1056980 Eutrema salsugineum
Thhalv10003890m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1043459-1053458 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374871 5261 Brassicaceae View MSA
123838867 5264 Brassicales-Malvales View MSA
124338337 5266 SBM View MSA
124237367 5268 Malvidae View MSA
124069431 5270 Rosid View MSA
123745060 5271 Pentapetalae View MSA
122793477 5272 Eudicot View MSA
122046808 5273 Angiosperm View MSA
121344420 5274 Embryophyte View MSA
123427141 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain