Gene : Thhalv10003599m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.4.1.1 - Glycogen phosphorylase / Polyphosphorylase Genomic Order:  1335
Name:  ? Thhalv10003599m.g Secondary Identifier:  ? PAC:20199348
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7238 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003599m.g 0.5kb upstream 0.5kb upstream 5548 true scaffold_6: 5392362-5397909 Eutrema salsugineum
Thhalv10003599m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5397410-5397909 Eutrema salsugineum
Thhalv10003599m.g 0.5kb downstream 0.5kb downstream 5548 true scaffold_6: 5391862-5397409 Eutrema salsugineum
Thhalv10003599m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5391862-5392361 Eutrema salsugineum
Thhalv10003599m.g 1.0kb upstream 1.0kb upstream 6048 true scaffold_6: 5392362-5398409 Eutrema salsugineum
Thhalv10003599m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5397410-5398409 Eutrema salsugineum
Thhalv10003599m.g 1.0kb downstream 1.0kb downstream 6048 true scaffold_6: 5391362-5397409 Eutrema salsugineum
Thhalv10003599m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5391362-5392361 Eutrema salsugineum
Thhalv10003599m.g 2.0kb upstream 2.0kb upstream 7048 true scaffold_6: 5392362-5399409 Eutrema salsugineum
Thhalv10003599m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5397410-5399409 Eutrema salsugineum
Thhalv10003599m.g 2.0kb downstream 2.0kb downstream 7048 true scaffold_6: 5390362-5397409 Eutrema salsugineum
Thhalv10003599m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5390362-5392361 Eutrema salsugineum
Thhalv10003599m.g 5.0kb upstream 5.0kb upstream 10048 true scaffold_6: 5392362-5402409 Eutrema salsugineum
Thhalv10003599m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5397410-5402409 Eutrema salsugineum
Thhalv10003599m.g 5.0kb downstream 5.0kb downstream 10048 true scaffold_6: 5387362-5397409 Eutrema salsugineum
Thhalv10003599m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5387362-5392361 Eutrema salsugineum
Thhalv10003599m.g 10.0kb upstream 10.0kb upstream 15048 true scaffold_6: 5392362-5407409 Eutrema salsugineum
Thhalv10003599m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5397410-5407409 Eutrema salsugineum
Thhalv10003599m.g 10.0kb downstream 10.0kb downstream 15048 true scaffold_6: 5382362-5397409 Eutrema salsugineum
Thhalv10003599m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5382362-5392361 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370599 5261 Brassicaceae View MSA
123834148 5264 Brassicales-Malvales View MSA
124350391 5266 SBM View MSA
124253620 5268 Malvidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain