Gene : Thhalv10004162m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR21049 - RIBOPHORIN I Genomic Order:  1845
Name:  ? Thhalv10004162m.g Secondary Identifier:  ? PAC:20199339
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004162m.g 0.5kb upstream 0.5kb upstream 3814 true scaffold_6: 7616516-7620329 Eutrema salsugineum
Thhalv10004162m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7616516-7617015 Eutrema salsugineum
Thhalv10004162m.g 0.5kb downstream 0.5kb downstream 3814 true scaffold_6: 7617016-7620829 Eutrema salsugineum
Thhalv10004162m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7620330-7620829 Eutrema salsugineum
Thhalv10004162m.g 1.0kb upstream 1.0kb upstream 4314 true scaffold_6: 7616016-7620329 Eutrema salsugineum
Thhalv10004162m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7616016-7617015 Eutrema salsugineum
Thhalv10004162m.g 1.0kb downstream 1.0kb downstream 4314 true scaffold_6: 7617016-7621329 Eutrema salsugineum
Thhalv10004162m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7620330-7621329 Eutrema salsugineum
Thhalv10004162m.g 2.0kb upstream 2.0kb upstream 5314 true scaffold_6: 7615016-7620329 Eutrema salsugineum
Thhalv10004162m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7615016-7617015 Eutrema salsugineum
Thhalv10004162m.g 2.0kb downstream 2.0kb downstream 5314 true scaffold_6: 7617016-7622329 Eutrema salsugineum
Thhalv10004162m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7620330-7622329 Eutrema salsugineum
Thhalv10004162m.g 5.0kb upstream 5.0kb upstream 8314 true scaffold_6: 7612016-7620329 Eutrema salsugineum
Thhalv10004162m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7612016-7617015 Eutrema salsugineum
Thhalv10004162m.g 5.0kb downstream 5.0kb downstream 8314 true scaffold_6: 7617016-7625329 Eutrema salsugineum
Thhalv10004162m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7620330-7625329 Eutrema salsugineum
Thhalv10004162m.g 10.0kb upstream 10.0kb upstream 13314 true scaffold_6: 7607016-7620329 Eutrema salsugineum
Thhalv10004162m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7607016-7617015 Eutrema salsugineum
Thhalv10004162m.g 10.0kb downstream 10.0kb downstream 13314 true scaffold_6: 7617016-7630329 Eutrema salsugineum
Thhalv10004162m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7620330-7630329 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368155 5261 Brassicaceae View MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain