Gene : Thhalv10004203m.g E. salsugineum v1.0
Defline:  (1 of 3) 6.1.1.11 - Serine--tRNA ligase / Seryl-tRNA synthetase Genomic Order:  1046
Name:  ? Thhalv10004203m.g Secondary Identifier:  ? PAC:20199107
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004203m.g 0.5kb upstream 0.5kb upstream 3505 true scaffold_6: 4207932-4211436 Eutrema salsugineum
Thhalv10004203m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4210937-4211436 Eutrema salsugineum
Thhalv10004203m.g 0.5kb downstream 0.5kb downstream 3505 true scaffold_6: 4207432-4210936 Eutrema salsugineum
Thhalv10004203m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4207432-4207931 Eutrema salsugineum
Thhalv10004203m.g 1.0kb upstream 1.0kb upstream 4005 true scaffold_6: 4207932-4211936 Eutrema salsugineum
Thhalv10004203m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4210937-4211936 Eutrema salsugineum
Thhalv10004203m.g 1.0kb downstream 1.0kb downstream 4005 true scaffold_6: 4206932-4210936 Eutrema salsugineum
Thhalv10004203m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4206932-4207931 Eutrema salsugineum
Thhalv10004203m.g 2.0kb upstream 2.0kb upstream 5005 true scaffold_6: 4207932-4212936 Eutrema salsugineum
Thhalv10004203m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4210937-4212936 Eutrema salsugineum
Thhalv10004203m.g 2.0kb downstream 2.0kb downstream 5005 true scaffold_6: 4205932-4210936 Eutrema salsugineum
Thhalv10004203m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4205932-4207931 Eutrema salsugineum
Thhalv10004203m.g 5.0kb upstream 5.0kb upstream 8005 true scaffold_6: 4207932-4215936 Eutrema salsugineum
Thhalv10004203m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4210937-4215936 Eutrema salsugineum
Thhalv10004203m.g 5.0kb downstream 5.0kb downstream 8005 true scaffold_6: 4202932-4210936 Eutrema salsugineum
Thhalv10004203m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4202932-4207931 Eutrema salsugineum
Thhalv10004203m.g 10.0kb upstream 10.0kb upstream 13005 true scaffold_6: 4207932-4220936 Eutrema salsugineum
Thhalv10004203m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4210937-4220936 Eutrema salsugineum
Thhalv10004203m.g 10.0kb downstream 10.0kb downstream 13005 true scaffold_6: 4197932-4210936 Eutrema salsugineum
Thhalv10004203m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4197932-4207931 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374239 5261 Brassicaceae View MSA
123836475 5264 Brassicales-Malvales View MSA
124340447 5266 SBM View MSA
124237440 5268 Malvidae View MSA
124063833 5270 Rosid View MSA
123738536 5271 Pentapetalae View MSA
122786779 5272 Eudicot View MSA
122041756 5273 Angiosperm View MSA
121347508 5274 Embryophyte View MSA
123423893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain