Gene : Thhalv10004181m.g E. salsugineum v1.0

Defline:  (1 of 2) PTHR33914:SF2 - 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  1680
Name:  ? Thhalv10004181m.g Secondary Identifier:  ? PAC:20200139

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004181m.g 0.5kb upstream 0.5kb upstream 4386 true scaffold_6: 6849650-6854035 Eutrema salsugineum
Thhalv10004181m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6853536-6854035 Eutrema salsugineum
Thhalv10004181m.g 0.5kb downstream 0.5kb downstream 4386 true scaffold_6: 6849150-6853535 Eutrema salsugineum
Thhalv10004181m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6849150-6849649 Eutrema salsugineum
Thhalv10004181m.g 1.0kb upstream 1.0kb upstream 4886 true scaffold_6: 6849650-6854535 Eutrema salsugineum
Thhalv10004181m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6853536-6854535 Eutrema salsugineum
Thhalv10004181m.g 1.0kb downstream 1.0kb downstream 4886 true scaffold_6: 6848650-6853535 Eutrema salsugineum
Thhalv10004181m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6848650-6849649 Eutrema salsugineum
Thhalv10004181m.g 2.0kb upstream 2.0kb upstream 5886 true scaffold_6: 6849650-6855535 Eutrema salsugineum
Thhalv10004181m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6853536-6855535 Eutrema salsugineum
Thhalv10004181m.g 2.0kb downstream 2.0kb downstream 5886 true scaffold_6: 6847650-6853535 Eutrema salsugineum
Thhalv10004181m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6847650-6849649 Eutrema salsugineum
Thhalv10004181m.g 5.0kb upstream 5.0kb upstream 8886 true scaffold_6: 6849650-6858535 Eutrema salsugineum
Thhalv10004181m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6853536-6858535 Eutrema salsugineum
Thhalv10004181m.g 5.0kb downstream 5.0kb downstream 8886 true scaffold_6: 6844650-6853535 Eutrema salsugineum
Thhalv10004181m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6844650-6849649 Eutrema salsugineum
Thhalv10004181m.g 10.0kb upstream 10.0kb upstream 13886 true scaffold_6: 6849650-6863535 Eutrema salsugineum
Thhalv10004181m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6853536-6863535 Eutrema salsugineum
Thhalv10004181m.g 10.0kb downstream 10.0kb downstream 13886 true scaffold_6: 6839650-6853535 Eutrema salsugineum
Thhalv10004181m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6839650-6849649 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372161 5261 Brassicaceae View MSA
123836320 5264 Brassicales-Malvales View MSA
124336784 5266 SBM View MSA
124253505 5268 Malvidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain