Gene : Thhalv10004282m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  917
Name:  ? Thhalv10004282m.g Secondary Identifier:  ? PAC:20199544
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004282m.g 0.5kb upstream 0.5kb upstream 3177 true scaffold_6: 3672944-3676120 Eutrema salsugineum
Thhalv10004282m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3675621-3676120 Eutrema salsugineum
Thhalv10004282m.g 0.5kb downstream 0.5kb downstream 3177 true scaffold_6: 3672444-3675620 Eutrema salsugineum
Thhalv10004282m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3672444-3672943 Eutrema salsugineum
Thhalv10004282m.g 1.0kb upstream 1.0kb upstream 3677 true scaffold_6: 3672944-3676620 Eutrema salsugineum
Thhalv10004282m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3675621-3676620 Eutrema salsugineum
Thhalv10004282m.g 1.0kb downstream 1.0kb downstream 3677 true scaffold_6: 3671944-3675620 Eutrema salsugineum
Thhalv10004282m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3671944-3672943 Eutrema salsugineum
Thhalv10004282m.g 2.0kb upstream 2.0kb upstream 4677 true scaffold_6: 3672944-3677620 Eutrema salsugineum
Thhalv10004282m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3675621-3677620 Eutrema salsugineum
Thhalv10004282m.g 2.0kb downstream 2.0kb downstream 4677 true scaffold_6: 3670944-3675620 Eutrema salsugineum
Thhalv10004282m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3670944-3672943 Eutrema salsugineum
Thhalv10004282m.g 5.0kb upstream 5.0kb upstream 7677 true scaffold_6: 3672944-3680620 Eutrema salsugineum
Thhalv10004282m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3675621-3680620 Eutrema salsugineum
Thhalv10004282m.g 5.0kb downstream 5.0kb downstream 7677 true scaffold_6: 3667944-3675620 Eutrema salsugineum
Thhalv10004282m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3667944-3672943 Eutrema salsugineum
Thhalv10004282m.g 10.0kb upstream 10.0kb upstream 12677 true scaffold_6: 3672944-3685620 Eutrema salsugineum
Thhalv10004282m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3675621-3685620 Eutrema salsugineum
Thhalv10004282m.g 10.0kb downstream 10.0kb downstream 12677 true scaffold_6: 3662944-3675620 Eutrema salsugineum
Thhalv10004282m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3662944-3672943 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371447 5261 Brassicaceae View MSA
123834592 5264 Brassicales-Malvales View MSA
124345724 5266 SBM View MSA
124244331 5268 Malvidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain