Gene : Thhalv10004035m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  386
Name:  ? Thhalv10004035m.g Secondary Identifier:  ? PAC:20199518
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum HISTSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004035m.g 0.5kb upstream 0.5kb upstream 3961 true scaffold_6: 1485433-1489393 Eutrema salsugineum
Thhalv10004035m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1485433-1485932 Eutrema salsugineum
Thhalv10004035m.g 0.5kb downstream 0.5kb downstream 3961 true scaffold_6: 1485933-1489893 Eutrema salsugineum
Thhalv10004035m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1489394-1489893 Eutrema salsugineum
Thhalv10004035m.g 1.0kb upstream 1.0kb upstream 4461 true scaffold_6: 1484933-1489393 Eutrema salsugineum
Thhalv10004035m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1484933-1485932 Eutrema salsugineum
Thhalv10004035m.g 1.0kb downstream 1.0kb downstream 4461 true scaffold_6: 1485933-1490393 Eutrema salsugineum
Thhalv10004035m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1489394-1490393 Eutrema salsugineum
Thhalv10004035m.g 2.0kb upstream 2.0kb upstream 5461 true scaffold_6: 1483933-1489393 Eutrema salsugineum
Thhalv10004035m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1483933-1485932 Eutrema salsugineum
Thhalv10004035m.g 2.0kb downstream 2.0kb downstream 5461 true scaffold_6: 1485933-1491393 Eutrema salsugineum
Thhalv10004035m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1489394-1491393 Eutrema salsugineum
Thhalv10004035m.g 5.0kb upstream 5.0kb upstream 8461 true scaffold_6: 1480933-1489393 Eutrema salsugineum
Thhalv10004035m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1480933-1485932 Eutrema salsugineum
Thhalv10004035m.g 5.0kb downstream 5.0kb downstream 8461 true scaffold_6: 1485933-1494393 Eutrema salsugineum
Thhalv10004035m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1489394-1494393 Eutrema salsugineum
Thhalv10004035m.g 10.0kb upstream 10.0kb upstream 13461 true scaffold_6: 1475933-1489393 Eutrema salsugineum
Thhalv10004035m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1475933-1485932 Eutrema salsugineum
Thhalv10004035m.g 10.0kb downstream 10.0kb downstream 13461 true scaffold_6: 1485933-1499393 Eutrema salsugineum
Thhalv10004035m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1489394-1499393 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369392 5261 Brassicaceae View MSA
123839930 5264 Brassicales-Malvales View MSA
124340813 5266 SBM View MSA
124241188 5268 Malvidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain