Gene : Thhalv10004065m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR13914 - PROLINE OXIDASE Genomic Order:  1297
Name:  ? Thhalv10004065m.g Secondary Identifier:  ? PAC:20200172
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CITRULBIO-PWY Eutrema salsugineum pathologic  
Esalsugineum PROUT-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-6922 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004065m.g 0.5kb upstream 0.5kb upstream 3475 true scaffold_6: 5214097-5217571 Eutrema salsugineum
Thhalv10004065m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5214097-5214596 Eutrema salsugineum
Thhalv10004065m.g 0.5kb downstream 0.5kb downstream 3475 true scaffold_6: 5214597-5218071 Eutrema salsugineum
Thhalv10004065m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5217572-5218071 Eutrema salsugineum
Thhalv10004065m.g 1.0kb upstream 1.0kb upstream 3975 true scaffold_6: 5213597-5217571 Eutrema salsugineum
Thhalv10004065m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5213597-5214596 Eutrema salsugineum
Thhalv10004065m.g 1.0kb downstream 1.0kb downstream 3975 true scaffold_6: 5214597-5218571 Eutrema salsugineum
Thhalv10004065m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5217572-5218571 Eutrema salsugineum
Thhalv10004065m.g 2.0kb upstream 2.0kb upstream 4975 true scaffold_6: 5212597-5217571 Eutrema salsugineum
Thhalv10004065m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5212597-5214596 Eutrema salsugineum
Thhalv10004065m.g 2.0kb downstream 2.0kb downstream 4975 true scaffold_6: 5214597-5219571 Eutrema salsugineum
Thhalv10004065m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5217572-5219571 Eutrema salsugineum
Thhalv10004065m.g 5.0kb upstream 5.0kb upstream 7975 true scaffold_6: 5209597-5217571 Eutrema salsugineum
Thhalv10004065m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5209597-5214596 Eutrema salsugineum
Thhalv10004065m.g 5.0kb downstream 5.0kb downstream 7975 true scaffold_6: 5214597-5222571 Eutrema salsugineum
Thhalv10004065m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5217572-5222571 Eutrema salsugineum
Thhalv10004065m.g 10.0kb upstream 10.0kb upstream 12975 true scaffold_6: 5204597-5217571 Eutrema salsugineum
Thhalv10004065m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5204597-5214596 Eutrema salsugineum
Thhalv10004065m.g 10.0kb downstream 10.0kb downstream 12975 true scaffold_6: 5214597-5227571 Eutrema salsugineum
Thhalv10004065m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5217572-5227571 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373825 5261 Brassicaceae View MSA
123839513 5264 Brassicales-Malvales View MSA
124339055 5266 SBM View MSA
124243556 5268 Malvidae View MSA
124068346 5270 Rosid View MSA
123743697 5271 Pentapetalae View MSA
122792525 5272 Eudicot View MSA
122047709 5273 Angiosperm View MSA
121345691 5274 Embryophyte View MSA
123427745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain