Gene : Thhalv10004660m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1900
Name:  ? Thhalv10004660m.g Secondary Identifier:  ? PAC:20200194
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004660m.g 0.5kb upstream 0.5kb upstream 2994 true scaffold_6: 8280938-8283931 Eutrema salsugineum
Thhalv10004660m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8283432-8283931 Eutrema salsugineum
Thhalv10004660m.g 0.5kb downstream 0.5kb downstream 2994 true scaffold_6: 8280438-8283431 Eutrema salsugineum
Thhalv10004660m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8280438-8280937 Eutrema salsugineum
Thhalv10004660m.g 1.0kb upstream 1.0kb upstream 3494 true scaffold_6: 8280938-8284431 Eutrema salsugineum
Thhalv10004660m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8283432-8284431 Eutrema salsugineum
Thhalv10004660m.g 1.0kb downstream 1.0kb downstream 3494 true scaffold_6: 8279938-8283431 Eutrema salsugineum
Thhalv10004660m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8279938-8280937 Eutrema salsugineum
Thhalv10004660m.g 2.0kb upstream 2.0kb upstream 4494 true scaffold_6: 8280938-8285431 Eutrema salsugineum
Thhalv10004660m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8283432-8285431 Eutrema salsugineum
Thhalv10004660m.g 2.0kb downstream 2.0kb downstream 4494 true scaffold_6: 8278938-8283431 Eutrema salsugineum
Thhalv10004660m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8278938-8280937 Eutrema salsugineum
Thhalv10004660m.g 5.0kb upstream 5.0kb upstream 7494 true scaffold_6: 8280938-8288431 Eutrema salsugineum
Thhalv10004660m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8283432-8288431 Eutrema salsugineum
Thhalv10004660m.g 5.0kb downstream 5.0kb downstream 7494 true scaffold_6: 8275938-8283431 Eutrema salsugineum
Thhalv10004660m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8275938-8280937 Eutrema salsugineum
Thhalv10004660m.g 10.0kb upstream 10.0kb upstream 12494 true scaffold_6: 8280938-8293431 Eutrema salsugineum
Thhalv10004660m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8283432-8293431 Eutrema salsugineum
Thhalv10004660m.g 10.0kb downstream 10.0kb downstream 12494 true scaffold_6: 8270938-8283431 Eutrema salsugineum
Thhalv10004660m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8270938-8280937 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367335 5261 Brassicaceae View MSA
123836180 5264 Brassicales-Malvales View MSA
124337596 5266 SBM View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain