Gene : Thhalv10004637m.g E. salsugineum v1.0
Defline:  (1 of 5) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  144
Name:  ? Thhalv10004637m.g Secondary Identifier:  ? PAC:20198847
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004637m.g 0.5kb upstream 0.5kb upstream 1985 true scaffold_6: 537541-539525 Eutrema salsugineum
Thhalv10004637m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 539026-539525 Eutrema salsugineum
Thhalv10004637m.g 0.5kb downstream 0.5kb downstream 1985 true scaffold_6: 537041-539025 Eutrema salsugineum
Thhalv10004637m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 537041-537540 Eutrema salsugineum
Thhalv10004637m.g 1.0kb upstream 1.0kb upstream 2485 true scaffold_6: 537541-540025 Eutrema salsugineum
Thhalv10004637m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 539026-540025 Eutrema salsugineum
Thhalv10004637m.g 1.0kb downstream 1.0kb downstream 2485 true scaffold_6: 536541-539025 Eutrema salsugineum
Thhalv10004637m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 536541-537540 Eutrema salsugineum
Thhalv10004637m.g 2.0kb upstream 2.0kb upstream 3485 true scaffold_6: 537541-541025 Eutrema salsugineum
Thhalv10004637m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 539026-541025 Eutrema salsugineum
Thhalv10004637m.g 2.0kb downstream 2.0kb downstream 3485 true scaffold_6: 535541-539025 Eutrema salsugineum
Thhalv10004637m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 535541-537540 Eutrema salsugineum
Thhalv10004637m.g 5.0kb upstream 5.0kb upstream 6485 true scaffold_6: 537541-544025 Eutrema salsugineum
Thhalv10004637m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 539026-544025 Eutrema salsugineum
Thhalv10004637m.g 5.0kb downstream 5.0kb downstream 6485 true scaffold_6: 532541-539025 Eutrema salsugineum
Thhalv10004637m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 532541-537540 Eutrema salsugineum
Thhalv10004637m.g 10.0kb upstream 10.0kb upstream 11485 true scaffold_6: 537541-549025 Eutrema salsugineum
Thhalv10004637m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 539026-549025 Eutrema salsugineum
Thhalv10004637m.g 10.0kb downstream 10.0kb downstream 11485 true scaffold_6: 527541-539025 Eutrema salsugineum
Thhalv10004637m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 527541-537540 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369829 5261 Brassicaceae View MSA
123840482 5264 Brassicales-Malvales View MSA
124351001 5266 SBM View MSA
124246973 5268 Malvidae View MSA
124069945 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain