Gene : Thhalv10004361m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1267
Name:  ? Thhalv10004361m.g Secondary Identifier:  ? PAC:20198907
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004361m.g 0.5kb upstream 0.5kb upstream 2342 true scaffold_6: 5098767-5101108 Eutrema salsugineum
Thhalv10004361m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5098767-5099266 Eutrema salsugineum
Thhalv10004361m.g 0.5kb downstream 0.5kb downstream 2342 true scaffold_6: 5099267-5101608 Eutrema salsugineum
Thhalv10004361m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5101109-5101608 Eutrema salsugineum
Thhalv10004361m.g 1.0kb upstream 1.0kb upstream 2842 true scaffold_6: 5098267-5101108 Eutrema salsugineum
Thhalv10004361m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5098267-5099266 Eutrema salsugineum
Thhalv10004361m.g 1.0kb downstream 1.0kb downstream 2842 true scaffold_6: 5099267-5102108 Eutrema salsugineum
Thhalv10004361m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5101109-5102108 Eutrema salsugineum
Thhalv10004361m.g 2.0kb upstream 2.0kb upstream 3842 true scaffold_6: 5097267-5101108 Eutrema salsugineum
Thhalv10004361m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5097267-5099266 Eutrema salsugineum
Thhalv10004361m.g 2.0kb downstream 2.0kb downstream 3842 true scaffold_6: 5099267-5103108 Eutrema salsugineum
Thhalv10004361m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5101109-5103108 Eutrema salsugineum
Thhalv10004361m.g 5.0kb upstream 5.0kb upstream 6842 true scaffold_6: 5094267-5101108 Eutrema salsugineum
Thhalv10004361m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5094267-5099266 Eutrema salsugineum
Thhalv10004361m.g 5.0kb downstream 5.0kb downstream 6842 true scaffold_6: 5099267-5106108 Eutrema salsugineum
Thhalv10004361m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5101109-5106108 Eutrema salsugineum
Thhalv10004361m.g 10.0kb upstream 10.0kb upstream 11842 true scaffold_6: 5089267-5101108 Eutrema salsugineum
Thhalv10004361m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5089267-5099266 Eutrema salsugineum
Thhalv10004361m.g 10.0kb downstream 10.0kb downstream 11842 true scaffold_6: 5099267-5111108 Eutrema salsugineum
Thhalv10004361m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5101109-5111108 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376211 5261 Brassicaceae View MSA
123841196 5264 Brassicales-Malvales View MSA
124349703 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain