Gene : Thhalv10004340m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  1260
Name:  ? Thhalv10004340m.g Secondary Identifier:  ? PAC:20199909
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ILEUDEG-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5910 Eutrema salsugineum pathologic  
Esalsugineum PWY-922 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004340m.g 0.5kb upstream 0.5kb upstream 4064 true scaffold_6: 5071031-5075094 Eutrema salsugineum
Thhalv10004340m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5071031-5071530 Eutrema salsugineum
Thhalv10004340m.g 0.5kb downstream 0.5kb downstream 4064 true scaffold_6: 5071531-5075594 Eutrema salsugineum
Thhalv10004340m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5075095-5075594 Eutrema salsugineum
Thhalv10004340m.g 1.0kb upstream 1.0kb upstream 4564 true scaffold_6: 5070531-5075094 Eutrema salsugineum
Thhalv10004340m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5070531-5071530 Eutrema salsugineum
Thhalv10004340m.g 1.0kb downstream 1.0kb downstream 4564 true scaffold_6: 5071531-5076094 Eutrema salsugineum
Thhalv10004340m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5075095-5076094 Eutrema salsugineum
Thhalv10004340m.g 2.0kb upstream 2.0kb upstream 5564 true scaffold_6: 5069531-5075094 Eutrema salsugineum
Thhalv10004340m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5069531-5071530 Eutrema salsugineum
Thhalv10004340m.g 2.0kb downstream 2.0kb downstream 5564 true scaffold_6: 5071531-5077094 Eutrema salsugineum
Thhalv10004340m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5075095-5077094 Eutrema salsugineum
Thhalv10004340m.g 5.0kb upstream 5.0kb upstream 8564 true scaffold_6: 5066531-5075094 Eutrema salsugineum
Thhalv10004340m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5066531-5071530 Eutrema salsugineum
Thhalv10004340m.g 5.0kb downstream 5.0kb downstream 8564 true scaffold_6: 5071531-5080094 Eutrema salsugineum
Thhalv10004340m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5075095-5080094 Eutrema salsugineum
Thhalv10004340m.g 10.0kb upstream 10.0kb upstream 13564 true scaffold_6: 5061531-5075094 Eutrema salsugineum
Thhalv10004340m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5061531-5071530 Eutrema salsugineum
Thhalv10004340m.g 10.0kb downstream 10.0kb downstream 13564 true scaffold_6: 5071531-5085094 Eutrema salsugineum
Thhalv10004340m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5075095-5085094 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372970 5261 Brassicaceae View MSA
123829231 5264 Brassicales-Malvales View MSA
124338302 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain