Gene : Thhalv10004341m.g E. salsugineum v1.0

Defline:  (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  733
Name:  ? Thhalv10004341m.g Secondary Identifier:  ? PAC:20200198

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004341m.g 0.5kb upstream 0.5kb upstream 1996 true scaffold_6: 2893890-2895885 Eutrema salsugineum
Thhalv10004341m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2895386-2895885 Eutrema salsugineum
Thhalv10004341m.g 0.5kb downstream 0.5kb downstream 1996 true scaffold_6: 2893390-2895385 Eutrema salsugineum
Thhalv10004341m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2893390-2893889 Eutrema salsugineum
Thhalv10004341m.g 1.0kb upstream 1.0kb upstream 2496 true scaffold_6: 2893890-2896385 Eutrema salsugineum
Thhalv10004341m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2895386-2896385 Eutrema salsugineum
Thhalv10004341m.g 1.0kb downstream 1.0kb downstream 2496 true scaffold_6: 2892890-2895385 Eutrema salsugineum
Thhalv10004341m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2892890-2893889 Eutrema salsugineum
Thhalv10004341m.g 2.0kb upstream 2.0kb upstream 3496 true scaffold_6: 2893890-2897385 Eutrema salsugineum
Thhalv10004341m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2895386-2897385 Eutrema salsugineum
Thhalv10004341m.g 2.0kb downstream 2.0kb downstream 3496 true scaffold_6: 2891890-2895385 Eutrema salsugineum
Thhalv10004341m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2891890-2893889 Eutrema salsugineum
Thhalv10004341m.g 5.0kb upstream 5.0kb upstream 6496 true scaffold_6: 2893890-2900385 Eutrema salsugineum
Thhalv10004341m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2895386-2900385 Eutrema salsugineum
Thhalv10004341m.g 5.0kb downstream 5.0kb downstream 6496 true scaffold_6: 2888890-2895385 Eutrema salsugineum
Thhalv10004341m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2888890-2893889 Eutrema salsugineum
Thhalv10004341m.g 10.0kb upstream 10.0kb upstream 11496 true scaffold_6: 2893890-2905385 Eutrema salsugineum
Thhalv10004341m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2895386-2905385 Eutrema salsugineum
Thhalv10004341m.g 10.0kb downstream 10.0kb downstream 11496 true scaffold_6: 2883890-2895385 Eutrema salsugineum
Thhalv10004341m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2883890-2893889 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122362733 5261 Brassicaceae View MSA
123834108 5264 Brassicales-Malvales View MSA
124340985 5266 SBM View MSA
124242304 5268 Malvidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain